Jatropha Genome Database

JcCB0456051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456051.10 - phase: 1 /pseudo/partial
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g00960.1                                                       266   2e-71
Glyma06g00990.1                                                       263   8e-71

>Glyma04g00960.1 
          Length = 697

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 133/164 (81%), Positives = 141/164 (85%)

Query: 33  GLEAGSKPELLLAMSCLCKGNPDSFLVCNGFKDAEYISLALLARKLALNTXXXXXXXXXX 92
           GLEAGSKPELLLAMSCLCKGNPD+ L+CNGFKDAEYISLAL+A KLALNT          
Sbjct: 174 GLEAGSKPELLLAMSCLCKGNPDALLICNGFKDAEYISLALVANKLALNTVIVLEQEEEV 233

Query: 93  XXXXXMSKKLSIRPVIGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLEGAGML 152
                +SKKL I+PVIG+RAKLRTKHSGHFG TSGEKGKFGLTT QILRVVKKL  AGML
Sbjct: 234 DLIVELSKKLCIKPVIGLRAKLRTKHSGHFGGTSGEKGKFGLTTAQILRVVKKLAHAGML 293

Query: 153 DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAQMQVL 196
           DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGA M+V+
Sbjct: 294 DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVI 337


>Glyma06g00990.1 
          Length = 691

 Score =  263 bits (673), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 141/164 (85%)

Query: 33  GLEAGSKPELLLAMSCLCKGNPDSFLVCNGFKDAEYISLALLARKLALNTXXXXXXXXXX 92
           GLEAGSKPELLLAMSCLCKGNPD+ L+CNGFKDAEYISLAL+A KLALNT          
Sbjct: 172 GLEAGSKPELLLAMSCLCKGNPDALLICNGFKDAEYISLALVANKLALNTVIVVEQEEEV 231

Query: 93  XXXXXMSKKLSIRPVIGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLEGAGML 152
                +SKKL I+PVIG+RAKLRTKHSGHFG TSGEKGKFGLTT QILRVVK L+ AGML
Sbjct: 232 DLIVELSKKLCIKPVIGLRAKLRTKHSGHFGGTSGEKGKFGLTTAQILRVVKNLDLAGML 291

Query: 153 DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAQMQVL 196
           DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGA M+V+
Sbjct: 292 DCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVI 335