Jatropha Genome Database

JcCB0455931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0455931.10 - phase: 0 
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma0041s00290.2                                                     137   3e-33
Glyma0041s00290.1                                                     137   3e-33
Glyma14g10320.1                                                       136   4e-33
Glyma04g05160.1                                                       130   4e-31
Glyma02g12400.2                                                       103   4e-23
Glyma02g12400.1                                                       103   4e-23
Glyma02g12400.3                                                       103   4e-23
Glyma18g49750.1                                                        92   9e-20
Glyma18g19030.1                                                        84   2e-17
Glyma01g06330.1                                                        81   2e-16
Glyma15g34710.1                                                        79   1e-15
Glyma11g21310.1                                                        75   1e-14
Glyma06g05250.1                                                        60   5e-10

>Glyma0041s00290.2 
          Length = 733

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/94 (71%), Positives = 77/94 (81%), Gaps = 1/94 (1%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAGINIA+C++LFS YS+LRKQPSN  VYFGRRLAS   R  D   ++RFVP
Sbjct: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRID-LCLERFVP 59

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          SPSWI KAWET+E+EILAIGGLDA+ F R+L F 
Sbjct: 60 SPSWILKAWETSEDEILAIGGLDAVVFVRILVFS 93


>Glyma0041s00290.1 
          Length = 750

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/94 (71%), Positives = 77/94 (81%), Gaps = 1/94 (1%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAGINIA+C++LFS YS+LRKQPSN  VYFGRRLAS   R  D   ++RFVP
Sbjct: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRID-LCLERFVP 59

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          SPSWI KAWET+E+EILAIGGLDA+ F R+L F 
Sbjct: 60 SPSWILKAWETSEDEILAIGGLDAVVFVRILVFS 93


>Glyma14g10320.1 
          Length = 750

 Score =  136 bits (343), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 1/93 (1%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAGINIA+C++LFS YS+LRKQPSN  VYFGRRLAS   R  D   ++RFVP
Sbjct: 1  MDIAALLTSAGINIAVCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRID-LCLERFVP 59

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTF 93
          SPSWI KAWET+E+EILAIGGLDA+ F R+L F
Sbjct: 60 SPSWILKAWETSEDEILAIGGLDAVVFVRILVF 92


>Glyma04g05160.1 
          Length = 721

 Score =  130 bits (326), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/93 (64%), Positives = 78/93 (83%), Gaps = 1/93 (1%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAG+NIA+C++LFSLYS+LRKQPSN  VYFGRR+AS   ++ D   ++RFVP
Sbjct: 1  MDIAALLTSAGVNIAVCVVLFSLYSVLRKQPSNVRVYFGRRVASRCSKSRD-LCLERFVP 59

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTF 93
          SP+W+ KAWETT++E+L+ GGLDA+ F RM+ F
Sbjct: 60 SPTWVMKAWETTQDEMLSTGGLDAVVFSRMVVF 92


>Glyma02g12400.2 
          Length = 684

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 62/94 (65%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          M + ALLTS GIN ALC+L F+LYSILRKQPSN  VY  R L     +    F ++R +P
Sbjct: 1  MIVSALLTSVGINTALCVLFFTLYSILRKQPSNYEVYVPRLLTEGTSKRRSRFKLERLIP 60

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          S  W+ KAW  +EEE+ ++ GLD + F RM+TF 
Sbjct: 61 SAGWVAKAWRLSEEELFSLSGLDGVVFMRMITFS 94


>Glyma02g12400.1 
          Length = 712

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 62/94 (65%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          M + ALLTS GIN ALC+L F+LYSILRKQPSN  VY  R L     +    F ++R +P
Sbjct: 1  MIVSALLTSVGINTALCVLFFTLYSILRKQPSNYEVYVPRLLTEGTSKRRSRFKLERLIP 60

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          S  W+ KAW  +EEE+ ++ GLD + F RM+TF 
Sbjct: 61 SAGWVAKAWRLSEEELFSLSGLDGVVFMRMITFS 94


>Glyma02g12400.3 
          Length = 698

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 62/94 (65%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          M + ALLTS GIN ALC+L F+LYSILRKQPSN  VY  R L     +    F ++R +P
Sbjct: 1  MIVSALLTSVGINTALCVLFFTLYSILRKQPSNYEVYVPRLLTEGTSKRRSRFKLERLIP 60

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          S  W+ KAW  +EEE+ ++ GLD + F RM+TF 
Sbjct: 61 SAGWVAKAWRLSEEELFSLSGLDGVVFMRMITFS 94


>Glyma18g49750.1 
          Length = 712

 Score = 92.4 bits (228), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          M + ALLTS  IN+ LC + F+LYS+LRKQP N  VY  R ++  + +  D F+++R +P
Sbjct: 1  MILAALLTSVVINLGLCFIFFTLYSVLRKQPGNITVYAPRLVSEGKRQEGDQFNLERLLP 60

Query: 61 SPS--WIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          + +  W+ KAWET+EEE L+  GLDA  F R+  F 
Sbjct: 61 ATTAGWVRKAWETSEEEFLSTAGLDAFVFMRIFVFS 96


>Glyma18g19030.1 
          Length = 226

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 1/72 (1%)

Query: 23 LYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVPSPSWIWKAWETTEEEILAIGGL 82
          +YS+LRKQPSN  VYFGR++AS   ++ D   + RFVPSP+W  KAWETT++E+L  GGL
Sbjct: 2  IYSVLRKQPSNVHVYFGRKVASWCSKSRDL-CLKRFVPSPTWEMKAWETTQDEMLITGGL 60

Query: 83 DALAFQRMLTFG 94
           A+ F  M+ F 
Sbjct: 61 HAVVFNIMVVFS 72


>Glyma01g06330.1 
          Length = 220

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 57/89 (64%)

Query: 6  LLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVPSPSWI 65
          LLTS GIN  LC+L F LYSILRKQPSN  VY  R L     +    F ++R +PS  W+
Sbjct: 1  LLTSVGINTTLCVLFFILYSILRKQPSNYEVYVPRLLTEGTSKRRSCFKLERLIPSVGWV 60

Query: 66 WKAWETTEEEILAIGGLDALAFQRMLTFG 94
           KAW  +EEE+L++ GLD + F  M+TF 
Sbjct: 61 AKAWRLSEEELLSLSGLDGVVFMCMITFS 89


>Glyma15g34710.1 
          Length = 67

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 27 LRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVPSPSWIWKAWETTEEEILAIGGLDALA 86
          L+KQPSN  VYFGR++AS R ++ D   ++RF PSP+W+ KAWETT++E++  GGL  + 
Sbjct: 1  LQKQPSNVHVYFGRKVASWRSKSRDL-CLERFYPSPTWVMKAWETTQDEMMIAGGLHVVV 59

Query: 87 FQRMLTF 93
          F +M+ F
Sbjct: 60 FNKMVVF 66


>Glyma11g21310.1 
          Length = 671

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 63/99 (63%), Gaps = 8/99 (8%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFF-----SI 55
          M+  +LL SA INI L ++   L+S+L+KQPSN  +Y+ R L+    R++  F     S+
Sbjct: 1  MNPHSLLASAAINIGLALVTLPLFSVLKKQPSNAPIYYARPLSR---RHHLPFDDSSSSL 57

Query: 56 DRFVPSPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          +RF+PS +W+ +A+  TE+EI+   GLDAL   R+  FG
Sbjct: 58 NRFLPSLAWLSRAFRVTEDEIVQDHGLDALVIIRLFKFG 96


>Glyma06g05250.1 
          Length = 290

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 25/81 (30%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAG+NI++                        ++AS R ++ D   ++RFVP
Sbjct: 1  MDIAALLTSAGVNISV------------------------KVASRRSKSRDL-CLERFVP 35

Query: 61 SPSWIWKAWETTEEEILAIGG 81
          SP+W+ KAWETT++E+L  GG
Sbjct: 36 SPTWVMKAWETTQDEMLTAGG 56