Jatropha Genome Database

JcCB0454241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0454241.10 + phase: 0 
         (408 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g37740.1                                                       579   e-165
Glyma08g01850.1                                                       573   e-164

>Glyma05g37740.1 
          Length = 727

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/384 (77%), Positives = 331/384 (86%), Gaps = 7/384 (1%)

Query: 1   MSLAELLDESKVVPVSVAGDLEVEITGIQHDSRMVNAGDLFVCCVGRKTDGHLYLSEADK 60
           M+LAELLDESKVVPVSV+GDLE+EITGIQHDSR+V++GDLFVCCVGRKTDGHL+LSEADK
Sbjct: 201 MTLAELLDESKVVPVSVSGDLEIEITGIQHDSRIVSSGDLFVCCVGRKTDGHLFLSEADK 260

Query: 61  RGAVAVVASKEIDIEETLGCKGLVIVEDTNAVLPALAAAFYKYPSKNMAVIGITGTDGKT 120
           RGAVAVVASKEIDIE+TLGCK LVIVEDTNAVLPALAA+F+K PS  MAVI ITGT GKT
Sbjct: 261 RGAVAVVASKEIDIEDTLGCKALVIVEDTNAVLPALAASFFKQPSTKMAVIAITGTYGKT 320

Query: 121 TAAYLIKGMYEAMGLRTGMLSTVAYYIHGDNKLESPNTAPDAVLVQNLMAKMVHNGTEAV 180
           T   LIK +YEAMGLRTGML++VA Y+HGDNK++  N  PD+VLVQNLMAKM+HNGTEAV
Sbjct: 321 TTTCLIKSLYEAMGLRTGMLNSVASYVHGDNKMDLGNMVPDSVLVQNLMAKMIHNGTEAV 380

Query: 181 VMEVSSQGPASGSCNEVDFDISVFTNLRVDHLDFQGTEEEYRDAKAELFARMVDPERHRK 240
           VME    G   G  +EVDFDI+VFTNL  +       EE  RDA+A+LF+RMVDPERHRK
Sbjct: 381 VMEAGGHGLGDGKYDEVDFDIAVFTNLSKE-------EEGDRDAQAKLFSRMVDPERHRK 433

Query: 241 IVNIEDPNASFFIAQGNPDVPVVTFAMDNKSADVHPLKFELSLFETQVLVNTPHGILEIS 300
           +VNI+DPNASFF++QG+ +VPVVTFAM+NK ADVHPLKFELSLFETQVLVNTP GILEIS
Sbjct: 434 VVNIDDPNASFFVSQGSQEVPVVTFAMENKEADVHPLKFELSLFETQVLVNTPTGILEIS 493

Query: 301 SGLLGRHNIYNILXXXXXXXXXXXPLEDIVRGIEEIDAVPGRCELIDEEQAFGVIVDSAH 360
           SGLLG+HNIYNIL           PLEDIVRGIEE+DAVPGRCELIDEEQAFGVIVD A 
Sbjct: 494 SGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYAS 553

Query: 361 TPEALSRLLDSVRELRPRRIITGI 384
           TP+ALSRLLDSVREL PRR+IT I
Sbjct: 554 TPDALSRLLDSVRELGPRRVITVI 577


>Glyma08g01850.1 
          Length = 750

 Score =  573 bits (1478), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 298/384 (77%), Positives = 329/384 (85%), Gaps = 7/384 (1%)

Query: 1   MSLAELLDESKVVPVSVAGDLEVEITGIQHDSRMVNAGDLFVCCVGRKTDGHLYLSEADK 60
           MSLAELLDESKVVPVSV+GDLE+EITGIQHDSR+V++GDLFVCCVG KTDGHL+LSEADK
Sbjct: 224 MSLAELLDESKVVPVSVSGDLEIEITGIQHDSRIVSSGDLFVCCVGSKTDGHLFLSEADK 283

Query: 61  RGAVAVVASKEIDIEETLGCKGLVIVEDTNAVLPALAAAFYKYPSKNMAVIGITGTDGKT 120
           RGAVAVVASKEIDIE+TLGCK LVIVEDTNAVLPALAA+FYK PS  MAVIGITGT GKT
Sbjct: 284 RGAVAVVASKEIDIEDTLGCKALVIVEDTNAVLPALAASFYKQPSTKMAVIGITGTYGKT 343

Query: 121 TAAYLIKGMYEAMGLRTGMLSTVAYYIHGDNKLESPNTAPDAVLVQNLMAKMVHNGTEAV 180
           T   LIK +YE+MGLRTGML++VA Y+HGDNKLE  N  PDAVLVQNLMAKM+HNGTE V
Sbjct: 344 TTTCLIKSLYESMGLRTGMLNSVASYVHGDNKLELGNAVPDAVLVQNLMAKMIHNGTEVV 403

Query: 181 VMEVSSQGPASGSCNEVDFDISVFTNLRVDHLDFQGTEEEYRDAKAELFARMVDPERHRK 240
           VME  + G   G  +EVDFDI+VFTNL  +       EE   DA+A+LF+RMVDPERHRK
Sbjct: 404 VMEAGAHGLGDGKYDEVDFDIAVFTNLSQE-------EEGDIDAQAKLFSRMVDPERHRK 456

Query: 241 IVNIEDPNASFFIAQGNPDVPVVTFAMDNKSADVHPLKFELSLFETQVLVNTPHGILEIS 300
           +VNI+DPNA FF++QGN +VPVVTFAM+NK ADVHPLKFELSLFETQVLVNTP GILEIS
Sbjct: 457 VVNIDDPNAPFFVSQGNREVPVVTFAMENKEADVHPLKFELSLFETQVLVNTPTGILEIS 516

Query: 301 SGLLGRHNIYNILXXXXXXXXXXXPLEDIVRGIEEIDAVPGRCELIDEEQAFGVIVDSAH 360
           SGLLG+HNIYNIL           PLEDIVRGIEE+DAVPGRCELIDEEQAFGVIVD A 
Sbjct: 517 SGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYAS 576

Query: 361 TPEALSRLLDSVRELRPRRIITGI 384
           TP+ALSRLLDSVREL PRR+IT I
Sbjct: 577 TPDALSRLLDSVRELGPRRVITVI 600