Jatropha Genome Database

JcCB0453091.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453091.20 - phase: 0 /partial
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14930.1                                                        83   9e-17

>Glyma06g14930.1 
          Length = 432

 Score = 82.8 bits (203), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/52 (71%), Positives = 45/52 (86%)

Query: 1   MASRGKINSPSLKTMMSTLVKKGYAATRSHIASNAIKTDCPMSMCIRIAKEL 52
           MASR KINSP LK +MS + +KGYAA+RSHI +NAIKT+CPM+ CI+IAKEL
Sbjct: 373 MASRAKINSPPLKALMSAMHQKGYAASRSHIETNAIKTNCPMTECIKIAKEL 424