Jatropha Genome Database

JcCB0450851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0450851.10 + phase: 1 /pseudo/partial
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g26450.1                                                       159   1e-39
Glyma20g17660.1                                                       154   2e-38

>Glyma10g26450.1 
          Length = 975

 Score =  159 bits (401), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 95/121 (78%)

Query: 21  REANHIEFCRIKNVLDEILHMHRNLELTEILKSLMDPTWVATGLKIDFETLVNECEWASD 80
           RE NH+EFCRIKNVLDEIL M+   EL EILK L++PTWVATGL+IDFETLV  CE AS 
Sbjct: 309 REVNHMEFCRIKNVLDEILQMYSTSELNEILKHLIEPTWVATGLEIDFETLVAGCEIASS 368

Query: 81  RICEMIYLEDKIDRKSDSHSVVPSEFFEDMELSWRGRVKRIHIEEEFAEVESAAQALSSA 140
           +I E++ L+D+ D+K +S S +P EFFEDME  W+GR+KRIHI++ F  VE AA+AL  A
Sbjct: 369 KIGEIVSLDDENDQKINSFSFIPHEFFEDMESKWKGRIKRIHIDDVFTAVEKAAEALHIA 428

Query: 141 V 141
           V
Sbjct: 429 V 429


>Glyma20g17660.1 
          Length = 665

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 95/121 (78%)

Query: 21  REANHIEFCRIKNVLDEILHMHRNLELTEILKSLMDPTWVATGLKIDFETLVNECEWASD 80
           RE NH+EFCRIKNVLDEIL M++  EL +ILK L+DPTWVATGL+IDFETLV  CE AS 
Sbjct: 9   REVNHMEFCRIKNVLDEILLMNKTSELNDILKHLIDPTWVATGLEIDFETLVAGCEVAST 68

Query: 81  RICEMIYLEDKIDRKSDSHSVVPSEFFEDMELSWRGRVKRIHIEEEFAEVESAAQALSSA 140
           +I ++I L+   D+K +S S++P EFFED+E  W+GR+KRIHI++ F  VE AA+AL  A
Sbjct: 69  KIGDIISLDGGNDQKINSFSLIPHEFFEDIESKWKGRIKRIHIDDVFTAVEKAAEALHIA 128

Query: 141 V 141
           V
Sbjct: 129 V 129