Jatropha Genome Database

JcCB0447941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0447941.10 - phase: 0 /partial
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g05600.4                                                       113   4e-26
Glyma09g05600.1                                                       112   9e-26
Glyma09g05600.2                                                       112   1e-25
Glyma09g05600.3                                                       111   1e-25
Glyma15g16870.1                                                       110   2e-25
Glyma15g16870.2                                                       110   3e-25

>Glyma09g05600.4 
          Length = 311

 Score =  113 bits (283), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 58/64 (90%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE SI ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 204 VMIKDFLKENSIDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 263

Query: 62  RLKV 65
           RLKV
Sbjct: 264 RLKV 267


>Glyma09g05600.1 
          Length = 483

 Score =  112 bits (280), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 58/64 (90%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE SI ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 204 VMIKDFLKENSIDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 263

Query: 62  RLKV 65
           RLKV
Sbjct: 264 RLKV 267


>Glyma09g05600.2 
          Length = 403

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/65 (80%), Positives = 58/65 (89%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE SI ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 124 VMIKDFLKENSIDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 183

Query: 62  RLKVC 66
           RLKV 
Sbjct: 184 RLKVT 188


>Glyma09g05600.3 
          Length = 391

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/64 (81%), Positives = 58/64 (90%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE SI ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 204 VMIKDFLKENSIDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 263

Query: 62  RLKV 65
           RLKV
Sbjct: 264 RLKV 267


>Glyma15g16870.1 
          Length = 483

 Score =  110 bits (276), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE S+ ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 204 VMIKDFLKENSMDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 263

Query: 62  RLKV 65
           RLKV
Sbjct: 264 RLKV 267


>Glyma15g16870.2 
          Length = 403

 Score =  110 bits (276), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 58/65 (89%)

Query: 2   VTVQESLKEKSIGITEESLLQLKYDPRSVWGYIEVHIEQGPVLEWAGFPLGVVKGIAGQT 61
           V +++ LKE S+ ITEESLL+LKYDP+SVWGY+EVHIEQGPVLE  GFPLGVVKGIAGQT
Sbjct: 124 VMIKDFLKENSMDITEESLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQT 183

Query: 62  RLKVC 66
           RLKV 
Sbjct: 184 RLKVT 188