Jatropha Genome Database

JcCB0446791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0446791.10 + phase: 0 /partial
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34790.1                                                       239   6e-64
Glyma08g04890.1                                                       231   2e-61
Glyma10g38590.1                                                       139   6e-34
Glyma20g29230.1                                                       133   4e-32

>Glyma05g34790.1 
          Length = 582

 Score =  239 bits (609), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 114/128 (89%), Positives = 122/128 (95%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           MSAANGVRRVW+GQNGLLSTPAVSAVIRERVG DGS+ATGAFILTASHNPGGPHEDFGIK
Sbjct: 78  MSAANGVRRVWIGQNGLLSTPAVSAVIRERVGADGSRATGAFILTASHNPGGPHEDFGIK 137

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPEGITDKIYENT TI EYLIA DLP+VDI+  GV++F+GPEGPFDVEVFDS
Sbjct: 138 YNMENGGPAPEGITDKIYENTTTINEYLIASDLPDVDITTTGVTSFTGPEGPFDVEVFDS 197

Query: 120 ASDYVKLM 127
           ASDY+KLM
Sbjct: 198 ASDYIKLM 205


>Glyma08g04890.1 
          Length = 582

 Score =  231 bits (588), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 110/128 (85%), Positives = 122/128 (95%), Gaps = 1/128 (0%)

Query: 1   MSAANGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIK 60
           MSAANGVRRVW+GQNGLLSTPAVSAVIRE++G DGS+ATGAFILTASHNPGGP+EDFGIK
Sbjct: 78  MSAANGVRRVWIGQNGLLSTPAVSAVIREKLGADGSRATGAFILTASHNPGGPNEDFGIK 137

Query: 61  YNMENGGPAPEGITDKIYENTKTIKEYLIA-DLPNVDISAIGVSNFSGPEGPFDVEVFDS 119
           YNMENGGPAPEGITDKIYENT TI EYLIA DLP+VDI++ GV++F+GP GPFDVEVFDS
Sbjct: 138 YNMENGGPAPEGITDKIYENTTTINEYLIASDLPDVDITSTGVTSFTGPGGPFDVEVFDS 197

Query: 120 ASDYVKLM 127
           ASDY+KLM
Sbjct: 198 ASDYIKLM 205


>Glyma10g38590.1 
          Length = 628

 Score =  139 bits (351), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 91/123 (73%), Gaps = 10/123 (8%)

Query: 5   NGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIKYNME 64
           NGV ++ VG+ G+LSTPAVSAVIR+R      KA G FI++ASHNPGGP  D+GIK+N  
Sbjct: 150 NGVGKILVGKEGILSTPAVSAVIRKR------KANGGFIMSASHNPGGPEYDWGIKFNYS 203

Query: 65  NGGPAPEGITDKIYENTKTIKEYLIADLPNVDISAIGVSNFSGPEGPFDVEVFDSASDYV 124
           +G PAPE ITDKIY NT +I E  IAD+P+VD+S +GV+NF    G F VEV D  SDY+
Sbjct: 204 SGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKVGVTNF----GSFSVEVIDPVSDYL 259

Query: 125 KLM 127
           +L+
Sbjct: 260 ELL 262


>Glyma20g29230.1 
          Length = 628

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 10/123 (8%)

Query: 5   NGVRRVWVGQNGLLSTPAVSAVIRERVGVDGSKATGAFILTASHNPGGPHEDFGIKYNME 64
           NGV ++ VGQ G+LSTPAVSAVIR+R      KA G FI++ASHNPGGP  D+GIK+N  
Sbjct: 150 NGVGKILVGQEGILSTPAVSAVIRKR------KANGGFIMSASHNPGGPEYDWGIKFNYS 203

Query: 65  NGGPAPEGITDKIYENTKTIKEYLIADLPNVDISAIGVSNFSGPEGPFDVEVFDSASDYV 124
           +G PAPE ITDKIY NT +I    IAD+ +VDIS +GV+ F    G F VEV D  SDY+
Sbjct: 204 SGQPAPESITDKIYGNTLSISVIKIADILDVDISKVGVTKF----GSFSVEVIDPVSDYL 259

Query: 125 KLM 127
           +L+
Sbjct: 260 ELL 262