Jatropha Genome Database

JcCB0433251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0433251.20 - phase: 0 
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g11980.1                                                       224   2e-59
Glyma04g42790.1                                                       224   2e-59

>Glyma06g11980.1 
          Length = 361

 Score =  224 bits (571), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 115/121 (95%)

Query: 1   MQSTHMASEQITEEAVYLCTGNPLPRDIEQISYWLLNESFAETLKRISEIKTKKGLALVD 60
           +QSTHMAS+QITEEAVYLCTGNPLP+DIE ISYWLLNE FA++ KRI E+KT+KGLAL+D
Sbjct: 240 LQSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALID 299

Query: 61  IVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCNDKLQLGSLISSFTRARSTLVAA 120
           IVREVTMFVFKIKMPS VRVQL+ND+ADIEYRLSFGCNDKLQLGS+I+SFTRARS LVAA
Sbjct: 300 IVREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAA 359

Query: 121 A 121
           A
Sbjct: 360 A 360


>Glyma04g42790.1 
          Length = 363

 Score =  224 bits (570), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 115/121 (95%)

Query: 1   MQSTHMASEQITEEAVYLCTGNPLPRDIEQISYWLLNESFAETLKRISEIKTKKGLALVD 60
           +QSTHMAS+QITEE VYLCTGNPLP+DIEQISYWLLNE FA++ KRI E+KT+KGLALVD
Sbjct: 242 LQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALVD 301

Query: 61  IVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCNDKLQLGSLISSFTRARSTLVAA 120
           IVREVT+FVFKIKMPS VRVQL+ND+ADIEYRLSFGCNDKLQLGS+I+SF+RARS LVAA
Sbjct: 302 IVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVAA 361

Query: 121 A 121
           A
Sbjct: 362 A 362