Jatropha Genome Database

JcCB0432541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432541.10 + phase: 0 /pseudo/partial
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g41490.1                                                        84   8e-17
Glyma15g03900.1                                                        83   1e-16

>Glyma13g41490.1 
          Length = 851

 Score = 83.6 bits (205), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/46 (78%), Positives = 42/46 (91%)

Query: 118 LGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
           LGE RIILCE GA+H+LQKLQLNFPSDDVAFAL+  ++LPWL+KYL
Sbjct: 805 LGECRIILCEAGAKHKLQKLQLNFPSDDVAFALRDCKDLPWLSKYL 850


>Glyma15g03900.1 
          Length = 796

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/46 (78%), Positives = 41/46 (89%)

Query: 118 LGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
           LGE RIILCE GA+HR QKLQLNFPSDDVAFAL+  ++LPWL+KYL
Sbjct: 750 LGECRIILCEAGAKHRWQKLQLNFPSDDVAFALRDCKDLPWLSKYL 795