Jatropha Genome Database

JcCB0432121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432121.10 - phase: 2 /partial
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g41630.1                                                       293   6e-80
Glyma11g03730.1                                                       283   8e-77
Glyma08g26350.1                                                        59   4e-09

>Glyma01g41630.1 
          Length = 435

 Score =  293 bits (750), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 138/180 (76%), Positives = 159/180 (88%), Gaps = 4/180 (2%)

Query: 5   PKKGLYYCVIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRTIRNLYVENE 64
           PKKGL+YCV+YL+PGDYHRIHSP +WN+L RRHF+G    L+P+NERATRTIRNLY+ENE
Sbjct: 259 PKKGLFYCVVYLKPGDYHRIHSPADWNILARRHFSG---RLYPLNERATRTIRNLYIENE 315

Query: 65  RVVLEGLWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEPEGIG 124
           RV+LEGLWQEGFMA+AAIGATNIGSIELFIEPEL TN PRKK L+S+PPEER+Y  EG+G
Sbjct: 316 RVILEGLWQEGFMALAAIGATNIGSIELFIEPELHTNRPRKKFLHSEPPEERIYGCEGVG 375

Query: 125 KMLKKGEEVAAFNMGSTVVLVFQAPTLKLLKNRDSSSEFRFNIKRGDRVRVGEALGRWHD 184
           +MLKKG+E+ AFNMGSTVVLVFQAP  KL +  DSS EFRF + RGDR+RVGEALGRWH 
Sbjct: 376 RMLKKGDELGAFNMGSTVVLVFQAPISKLPEG-DSSQEFRFCVGRGDRIRVGEALGRWHS 434


>Glyma11g03730.1 
          Length = 177

 Score =  283 bits (723), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 136/180 (75%), Positives = 156/180 (86%), Gaps = 4/180 (2%)

Query: 5   PKKGLYYCVIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRTIRNLYVENE 64
           PKKGL+YCV+YL PGDYHRIHSP +WN+LVRRHF+G    L+P+NERA RTIRNLY+ENE
Sbjct: 1   PKKGLFYCVVYLNPGDYHRIHSPADWNILVRRHFSG---RLYPLNERAIRTIRNLYIENE 57

Query: 65  RVVLEGLWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEPEGIG 124
           RV+LEGLW EGFMA+AAIG TNIGSIELFIEPEL TN PRKK L+S+PPEER+YE EG+G
Sbjct: 58  RVILEGLWLEGFMALAAIGDTNIGSIELFIEPELHTNRPRKKFLHSEPPEERIYECEGLG 117

Query: 125 KMLKKGEEVAAFNMGSTVVLVFQAPTLKLLKNRDSSSEFRFNIKRGDRVRVGEALGRWHD 184
           +MLKKG+E+ AFNMGSTVVLVFQAP  KL +  DS  EFRF + RGDR+RVGEALGRWH 
Sbjct: 118 RMLKKGDELGAFNMGSTVVLVFQAPISKLHEG-DSFQEFRFCVGRGDRIRVGEALGRWHS 176


>Glyma08g26350.1 
          Length = 164

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 28/35 (80%)

Query: 4  SPKKGLYYCVIYLRPGDYHRIHSPVEWNVLVRRHF 38
          +PKKGL+Y V+YL  GDYH IHSP  WN+LV RHF
Sbjct: 44 NPKKGLFYYVVYLNHGDYHLIHSPTYWNILVCRHF 78