Jatropha Genome Database

JcCB0431651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431651.10 - phase: 0 /partial
         (341 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g14570.1                                                       486   e-137
Glyma03g27110.1                                                       485   e-137

>Glyma07g14570.1 
          Length = 498

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/337 (70%), Positives = 277/337 (82%), Gaps = 12/337 (3%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+QR P M  VEDGT RFL++L+ I++G H+L +S VYLLIPGLFSNHGPLYFV T
Sbjct: 164 DDIGWLQRDPGMPSVEDGTVRFLEILDNIKHGVHRLPNSVVYLLIPGLFSNHGPLYFVST 223

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K  FSKMGLACHIAKIHSEASVE NA ELK YIEE+YWGS KRVMLLGHSKGGVDAAAAL
Sbjct: 224 KVSFSKMGLACHIAKIHSEASVEKNAKELKEYIEEIYWGSNKRVMLLGHSKGGVDAAAAL 283

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYWSDLKDKVAGLAL QSPYGG+P+ASD+LREGQ+ D    RK+ E+LICK IKGD+RA
Sbjct: 284 SLYWSDLKDKVAGLALAQSPYGGTPIASDLLREGQLGDYVNLRKLTEILICKVIKGDMRA 343

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++RREF+  H LP+++P++SF +EA I+P V+AT++ +AHAE   LPL   G E
Sbjct: 344 LEDLTYERRREFLKEHHLPKEVPIVSFRTEAGISPAVLATLSHVAHAE---LPLVAPGGE 400

Query: 240 EPDSVVQAGRKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDRKL 299
                    RK+P+V+PL AAMA  A  LQ+RYGEKSDGLVTCRDAEVPGS+VVRP RKL
Sbjct: 401 --------SRKLPLVMPLGAAMAACAQLLQVRYGEKSDGLVTCRDAEVPGSIVVRPKRKL 452

Query: 300 DHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIK 336
           DHAWMVYSS   DP+E D S++CEALLT+LVE+G  K
Sbjct: 453 DHAWMVYSSLNDDPSEGDASQVCEALLTLLVEIGQTK 489


>Glyma03g27110.1 
          Length = 453

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/339 (70%), Positives = 276/339 (81%), Gaps = 16/339 (4%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW+QR P M PVEDGT RFL++L+ I++G HKL +S VYLLIPGLFSNHGPLYFV T
Sbjct: 119 DDIGWLQRDPGMPPVEDGTERFLEILDNIKHGVHKLPNSVVYLLIPGLFSNHGPLYFVST 178

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K  FSKMGLACHIAKIHSEASVE NA ELK YIEE+YWGS KRVMLLGHSKGGVDAAAAL
Sbjct: 179 KVSFSKMGLACHIAKIHSEASVEKNARELKEYIEEIYWGSNKRVMLLGHSKGGVDAAAAL 238

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYWSDLKDKVAGLAL QSPYGG+P+ASD+LREGQ+ D    RK+ E+LICK IKGD+RA
Sbjct: 239 SLYWSDLKDKVAGLALAQSPYGGTPIASDLLREGQLGDYVNLRKLTEILICKVIKGDMRA 298

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++RREF+  H LP+++P++SF +EA I+P V+AT++ +AHAELP          
Sbjct: 299 LEDLTYERRREFLKEHHLPKEVPIVSFRTEAGISPAVLATLSHVAHAELPL--------- 349

Query: 240 EPDSVVQAG--RKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDR 297
               V  AG  RK+PVV+PL AAMA  A  LQ+RYGEKSDGLVTCRDAEVPGSVVVRP R
Sbjct: 350 ----VAPAGESRKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCRDAEVPGSVVVRPKR 405

Query: 298 KLDHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIK 336
           KLDHAWMVYSS   D +E D  ++CEALLT+LVE+G  K
Sbjct: 406 KLDHAWMVYSSLNDDLSEGDAFQVCEALLTLLVEIGQKK 444