Jatropha Genome Database

JcCB0431061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431061.10 + phase: 0 
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g13270.1                                                       427   e-120
Glyma01g07790.1                                                       373   e-103

>Glyma02g13270.1 
          Length = 523

 Score =  427 bits (1099), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/299 (69%), Positives = 241/299 (80%), Gaps = 3/299 (1%)

Query: 1   MSLFKRLIPTKQGLGDAINHLRGPSFCLFHSASDSNMELHSQDQEVVIALGSNVGQRLHN 60
           MS+ K L   +  L  A  +L G  F  FH+AS S++ELHSQ++EVVIALGSNVG RLHN
Sbjct: 6   MSILKCLGEPRNKLFAARKYLEGLGFSSFHTASKSSVELHSQEEEVVIALGSNVGDRLHN 65

Query: 61  FNKALQMMKQSGINITRHGCLYETAPAYVTDQPHFLNSAVRAVTKHGPHELLEVLKKIEK 120
           F +AL++M+ SGINITRH CLYETAPAYVTDQP F+NSAVRAVTK GPHELL  LKKIEK
Sbjct: 66  FKEALKLMRNSGINITRHACLYETAPAYVTDQPRFINSAVRAVTKLGPHELLSALKKIEK 125

Query: 121 DIGRTAGIRYGPRPIDLDILFYGKFRIDSATLTVPHERIWERPFVMAPLVDLLGSDIEND 180
           D+GRT GIRYGPRPIDLDILFYGK+++ S  LT+PHERIWERPFVMAPL+DLLGS I++D
Sbjct: 126 DLGRTGGIRYGPRPIDLDILFYGKYKVRSDILTIPHERIWERPFVMAPLMDLLGSAIDSD 185

Query: 181 TVACWHSLSRHSGGLFESWEKLGGEHLI---GKEGLKRVIPIGNHLWDWSQKTSVMGIIN 237
           TVA WHS S HS GL   WE LG E LI   GKEG+ RV+P+ N L DWS++TSVMGI+N
Sbjct: 186 TVASWHSFSGHSRGLTGLWEDLGSESLIGEFGKEGMYRVMPVANGLLDWSRRTSVMGILN 245

Query: 238 LTPDSFSDGGKFQCVDSVVSQVHLMLSEGVDIIDFGAQSTRPMASRLSPQEELDRLMPV 296
           +TPDSFSDGG F+ V+S V QV LM+SEG D+ID GAQSTRP ASR+S  EEL RL+PV
Sbjct: 246 VTPDSFSDGGNFKSVESAVYQVRLMISEGADMIDIGAQSTRPTASRISAAEELGRLIPV 304


>Glyma01g07790.1 
          Length = 548

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/274 (67%), Positives = 218/274 (79%), Gaps = 15/274 (5%)

Query: 26  FCLFHSASDSNMELHSQDQEVVIALGSNVGQRLHNFNKALQMMKQSGINITRHGCLYETA 85
           F  FH+AS+S++E HSQ++EVVIALGSNVG RLHNF +AL++M+ SGINITRH CLYETA
Sbjct: 18  FSSFHTASNSSVE-HSQEEEVVIALGSNVGDRLHNFKEALKLMRNSGINITRHACLYETA 76

Query: 86  PAYVTDQPHFLNSAVRAVTKHGPHELLEVLKKIEKDIGRTAGIRYGPRPIDLDILFYGKF 145
           PAYVTDQP F+ SAVRAVTK GPHELL  LK+IEKD+GRT            DILFYGK+
Sbjct: 77  PAYVTDQPRFIYSAVRAVTKLGPHELLSTLKRIEKDLGRTD-----------DILFYGKY 125

Query: 146 RIDSATLTVPHERIWERPFVMAPLVDLLGSDIENDTVACWHSLSRHSGGLFESWEKLGGE 205
           ++ S  LT+PHERIWERPFVMAPL+DLLGS I++DTV  W+S S HS GL   WE LG E
Sbjct: 126 KVRSDILTIPHERIWERPFVMAPLMDLLGSAIDSDTVTSWNSFSGHSRGLSGLWEDLGSE 185

Query: 206 HLI---GKEGLKRVIPIGNHLWDWSQKTSVMGIINLTPDSFSDGGKFQCVDSVVSQVHLM 262
            LI   GKEG+ RV+P+ N L DWS +TSVMGI+N+TPDSFSDGG FQ V+S VSQV LM
Sbjct: 186 SLIGEFGKEGMYRVMPVANGLLDWSWRTSVMGILNVTPDSFSDGGHFQSVESAVSQVRLM 245

Query: 263 LSEGVDIIDFGAQSTRPMASRLSPQEELDRLMPV 296
           +SEG D+ID GA STRPMASR+S +EEL RL+PV
Sbjct: 246 ISEGADMIDIGALSTRPMASRISAEEELGRLIPV 279