Jatropha Genome Database

JcCB0430531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0430531.10 - phase: 0 /pseudo/partial
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g07490.1                                                       161   2e-40
Glyma17g08980.1                                                       154   3e-38
Glyma08g28010.1                                                       105   3e-23
Glyma02g13670.1                                                       104   5e-23
Glyma02g13670.2                                                       102   2e-22
Glyma01g09010.4                                                       102   2e-22
Glyma01g09010.1                                                       102   2e-22
Glyma01g09010.3                                                       100   7e-22
Glyma01g09010.2                                                       100   7e-22
Glyma18g51080.1                                                        91   5e-19
Glyma06g22790.1                                                        67   7e-12

>Glyma05g07490.1 
          Length = 548

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 106/155 (68%), Gaps = 13/155 (8%)

Query: 1   MIKSAKGSTQDDNLDDEEEFVLKKESSSPVHKGELRVKVDGKSTDQKANTPRSKHSATEQ 60
           M+KSA+ S Q++ L+ EE F LKKE SS   + EL VKVDGKSTDQK NTPRSKHSATEQ
Sbjct: 214 MMKSARDSAQNEVLESEETFFLKKEPSSNTQRAELLVKVDGKSTDQKPNTPRSKHSATEQ 273

Query: 61  RRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWRHLHILQVIEYIQFLQEKVQKYEG 120
           RRRSKIND    ++E          + ++           +L+VIEYI FLQEKV KYEG
Sbjct: 274 RRRSKINDRFQMLRELIPHSDQKRDKASF-----------LLEVIEYIHFLQEKVHKYEG 322

Query: 121 SYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
           S+QGW++EP +L+PWRN ++P ES+  Q +G + G
Sbjct: 323 SFQGWSNEPERLMPWRNNDKPAESF--QPRGTDNG 355


>Glyma17g08980.1 
          Length = 566

 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 15/156 (9%)

Query: 1   MIKSAKGS-TQDDNLDDEEEFVLKKESSSPVHKGELRVKVDGKSTDQKANTPRSKHSATE 59
           M+KSA+ S  QD+ L+ EE F LKKE SS   + ELRVKVD KSTDQK NTPRSKHSATE
Sbjct: 215 MMKSARDSNAQDEVLESEETFFLKKEPSSNTQR-ELRVKVDAKSTDQKPNTPRSKHSATE 273

Query: 60  QRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWRHLHILQVIEYIQFLQEKVQKYE 119
           QRRRSKIND    ++E          + ++           +L+V+EYI FLQEKV KYE
Sbjct: 274 QRRRSKINDRFQMLRELIPHSDQKRDKASF-----------LLEVVEYIHFLQEKVHKYE 322

Query: 120 GSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
           GS+QGW++EP KL+PWRN ++P E++  Q +G + G
Sbjct: 323 GSFQGWSNEPEKLMPWRNNDKPAETF--QPRGTDNG 356


>Glyma08g28010.1 
          Length = 339

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 72/120 (60%), Gaps = 11/120 (9%)

Query: 36  RVKVDGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISEC 95
           +VKVD  ST ++ N  RSKHS TEQRRRSKIN+    +++          + ++      
Sbjct: 28  KVKVDEPSTGKRVNPHRSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASF------ 81

Query: 96  WRHLHILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
                +L+VIEYIQFLQEK+Q YE +Y+GWN EP KL PWRN + P E+  D SQ    G
Sbjct: 82  -----LLEVIEYIQFLQEKIQIYEQTYEGWNQEPTKLTPWRNHHGPAENTTDPSQASQNG 136


>Glyma02g13670.1 
          Length = 336

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 12/118 (10%)

Query: 38  KVDGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWR 97
           K DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++        
Sbjct: 34  KADGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF-------- 84

Query: 98  HLHILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
              +L+VIEY+Q+LQEKVQKYEGSYQGW  EP+KL+PWRN +   +S+A Q   +  G
Sbjct: 85  ---LLEVIEYVQYLQEKVQKYEGSYQGWGQEPSKLMPWRNSHWRVQSFAGQPTAVKNG 139


>Glyma02g13670.2 
          Length = 335

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 12/116 (10%)

Query: 40  DGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWRHL 99
           DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++          
Sbjct: 35  DGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF---------- 83

Query: 100 HILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
            +L+VIEY+Q+LQEKVQKYEGSYQGW  EP+KL+PWRN +   +S+A Q   +  G
Sbjct: 84  -LLEVIEYVQYLQEKVQKYEGSYQGWGQEPSKLMPWRNSHWRVQSFAGQPTAVKNG 138


>Glyma01g09010.4 
          Length = 336

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 12/118 (10%)

Query: 38  KVDGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWR 97
           K DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++        
Sbjct: 34  KADGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF-------- 84

Query: 98  HLHILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
              +L+V+EY+Q+LQEKVQKYEGSYQGW  EP KL+PWRN +   +S+A Q   +  G
Sbjct: 85  ---LLEVMEYVQYLQEKVQKYEGSYQGWGQEPLKLMPWRNSHWRVQSFAGQPTAVKNG 139


>Glyma01g09010.1 
          Length = 336

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 12/118 (10%)

Query: 38  KVDGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWR 97
           K DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++        
Sbjct: 34  KADGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF-------- 84

Query: 98  HLHILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
              +L+V+EY+Q+LQEKVQKYEGSYQGW  EP KL+PWRN +   +S+A Q   +  G
Sbjct: 85  ---LLEVMEYVQYLQEKVQKYEGSYQGWGQEPLKLMPWRNSHWRVQSFAGQPTAVKNG 139


>Glyma01g09010.3 
          Length = 335

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 12/116 (10%)

Query: 40  DGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWRHL 99
           DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++          
Sbjct: 35  DGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF---------- 83

Query: 100 HILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
            +L+V+EY+Q+LQEKVQKYEGSYQGW  EP KL+PWRN +   +S+A Q   +  G
Sbjct: 84  -LLEVMEYVQYLQEKVQKYEGSYQGWGQEPLKLMPWRNSHWRVQSFAGQPTAVKNG 138


>Glyma01g09010.2 
          Length = 335

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 12/116 (10%)

Query: 40  DGKSTDQKANTPRSKHSATEQRRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECWRHL 99
           DGK+ D KA+  RSKHS TEQRRRSKIN+    +++            ++          
Sbjct: 35  DGKAID-KASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASF---------- 83

Query: 100 HILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
            +L+V+EY+Q+LQEKVQKYEGSYQGW  EP KL+PWRN +   +S+A Q   +  G
Sbjct: 84  -LLEVMEYVQYLQEKVQKYEGSYQGWGQEPLKLMPWRNSHWRVQSFAGQPTAVKNG 138


>Glyma18g51080.1 
          Length = 336

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 38/163 (23%)

Query: 1   MIKSAKGSTQDDNLDDEEEFVLKKESSSPVHKGELRVKVDGKSTDQKANTPRSKHSATEQ 60
           M +SAKG   + + DDEEE +    +SS       +VKVD  ST ++ N  RSKHS TEQ
Sbjct: 1   MARSAKGHQDEFDDDDEEELLTANNTSS-------KVKVDEPSTGKRVNPQRSKHSETEQ 53

Query: 61  RRRSKINDSLLEVKEXXXXXXXXXXEYNYSVISECW--------RHLHILQVIEYIQFLQ 112
           R                        E+ + V+ +          +   +L+VIEYIQFLQ
Sbjct: 54  R-----------------------FEWKFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQ 90

Query: 113 EKVQKYEGSYQGWNHEPAKLVPWRNGNRPTESYADQSQGINGG 155
           EK+Q YE +Y+GWN EP KL PWRN + P E+  D SQ    G
Sbjct: 91  EKLQIYEQTYEGWNQEPTKLTPWRNNHGPAENTTDPSQATQNG 133


>Glyma06g22790.1 
          Length = 112

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 3/56 (5%)

Query: 101 ILQVIEYIQFLQEKVQKYEGSYQGWNHEPAKLVPW-RNGNRPTESYADQSQGINGG 155
           +L+VIEYI FLQEKV KYEGS+QGW +E  KL+PW +N ++P ES+  Q  G + G
Sbjct: 21  LLEVIEYIHFLQEKVHKYEGSFQGWRNEQEKLMPWKKNNDKPAESF--QPCGTDNG 74