Jatropha Genome Database

JcCB0430181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0430181.10 - phase: 0 /partial
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g06720.1                                                       288   6e-78
Glyma13g32610.1                                                       285   3e-77

>Glyma15g06720.1 
          Length = 429

 Score =  288 bits (737), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 150/247 (60%), Positives = 182/247 (73%), Gaps = 7/247 (2%)

Query: 22  YEKIEAPKFVDLNAPDPYHHGDDCYWFCMRVGCDQKHEEEMDSETIYKNFLLRVMAARSP 81
           YE IEAPKFVDL APD     DD +WFC RVGCDQKHE+E+DSE IYKNF+LRVMAARSP
Sbjct: 22  YENIEAPKFVDLTAPDSRRPDDDRHWFCFRVGCDQKHEQELDSEAIYKNFVLRVMAARSP 81

Query: 82  NIRLRKALHKKDSSTDLKCPRTVPAKPSKPRVSRLALISSISKRIVDPKVKVKPLSKQNA 141
           N+RLRKAL+++++S +LKCP T PA   K RVSR   ISS+S ++    VKVKPLSK  A
Sbjct: 82  NVRLRKALNRREASANLKCPLTAPA---KSRVSRTDFISSLSHKMTANNVKVKPLSKVAA 138

Query: 142 TPNAKAKQQPSIIAKALTTPR-AKKQLSNPEAFRSVRNPKTTATAMPKNRVVAKTLVFDS 200
           TPNAK KQ PS +AKALTTPR  +K++SN E FRSV++ K     +PK+RVVAK LVF S
Sbjct: 139 TPNAKVKQSPS-VAKALTTPRNHQKKVSNVEQFRSVQSKKALTVGVPKSRVVAKALVFHS 197

Query: 201 PKKSVRTKSSLELNTPVKTLCAGMKKLEITSAKKQVLGYDRPLPCDTAASRKKLRGREVK 260
           PKK+++ KSS+EL T ++TLC  M KLE+   KK   G    L    A  +K+LRGREVK
Sbjct: 198 PKKALKIKSSIELKTAMRTLCPAMNKLELNGVKKNGEGGSNSLA--VATWKKQLRGREVK 255

Query: 261 SRLFDGL 267
           SR+FD L
Sbjct: 256 SRVFDSL 262


>Glyma13g32610.1 
          Length = 430

 Score =  285 bits (730), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 149/247 (60%), Positives = 182/247 (73%), Gaps = 7/247 (2%)

Query: 22  YEKIEAPKFVDLNAPDPYHHGDDCYWFCMRVGCDQKHEEEMDSETIYKNFLLRVMAARSP 81
           YE IEAPKFVDL APD      D +WFC RVGCDQKHE+E+DSE IYKNF+LRVMAARSP
Sbjct: 23  YENIEAPKFVDLTAPDCRRPDHDRHWFCFRVGCDQKHEQELDSEAIYKNFVLRVMAARSP 82

Query: 82  NIRLRKALHKKDSSTDLKCPRTVPAKPSKPRVSRLALISSISKRIVDPKVKVKPLSKQNA 141
           N+RLRKAL+++++S +LKCP T PA   K RVSR+ LISS+  ++ D  VKVKPLS   A
Sbjct: 83  NVRLRKALNRREASANLKCPLTAPA---KSRVSRMDLISSLPHKMTDNNVKVKPLSMVAA 139

Query: 142 TPNAKAKQQPSIIAKALTTPR-AKKQLSNPEAFRSVRNPKTTATAMPKNRVVAKTLVFDS 200
           TPNAK KQ PS +AKALTTPR  +K++S  E FRSV++ K     +PK+RVVAK LVF S
Sbjct: 140 TPNAKVKQSPS-VAKALTTPRNHQKKVSKVEQFRSVQSKKALTVGVPKSRVVAKALVFHS 198

Query: 201 PKKSVRTKSSLELNTPVKTLCAGMKKLEITSAKKQVLGYDRPLPCDTAASRKKLRGREVK 260
           PKK ++ KSS+EL T ++TLC+ M KLE+   KK   G    L    A S+K+LRGREVK
Sbjct: 199 PKKVLKIKSSIELKTAMRTLCSAMNKLELNGVKKNGKGGSNSLA--VATSKKQLRGREVK 256

Query: 261 SRLFDGL 267
           SR+FD L
Sbjct: 257 SRVFDSL 263