Jatropha Genome Database

JcCB0429731.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429731.20 - phase: 0 
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03440.1                                                       335   1e-92
Glyma11g34900.1                                                       333   6e-92
Glyma11g34920.1                                                        75   3e-14
Glyma07g17180.1                                                        60   2e-09
Glyma18g41940.1                                                        60   2e-09
Glyma08g19430.1                                                        58   5e-09
Glyma10g36990.1                                                        54   7e-08
Glyma20g30620.1                                                        54   7e-08
Glyma16g28310.1                                                        53   2e-07

>Glyma18g03440.1 
          Length = 387

 Score =  335 bits (860), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 165/180 (91%), Positives = 170/180 (94%), Gaps = 1/180 (0%)

Query: 1   MGVYGPRTTYVLALKDFPGTHEFLLLDDGKWQHVKETTEIGEGKLFSPGNLRATSDNPDY 60
           MGV GPRTTYVLALKDFPGTHEFLLLD+GKWQHVKETTEIGEGKLFSPGNLRATSDNPDY
Sbjct: 209 MGVLGPRTTYVLALKDFPGTHEFLLLDEGKWQHVKETTEIGEGKLFSPGNLRATSDNPDY 268

Query: 61  DKLIHYYVREKYTLRYTGGMVPDVNQIIVKEKGIFTNVISPSSKAKLRLLFEVAPLGFLI 120
            K+I YYV EKYTLRYTGGMVPDVNQ+IVKEKGIFTNV SPS+KAKLRLLFEVAPLGFLI
Sbjct: 269 AKVIDYYVNEKYTLRYTGGMVPDVNQVIVKEKGIFTNVSSPSAKAKLRLLFEVAPLGFLI 328

Query: 121 EKAGGYSSDGHISVLDKEIKNLDDRTQVAYGSKNEIIRFEETLYGKSRLKTGGVPVGAAA 180
           EKAGGYSSDGH SVLDK I N+DDRTQVAYGSKNEIIRFEETLYGKSRLK GGV VGAAA
Sbjct: 329 EKAGGYSSDGHQSVLDKVISNIDDRTQVAYGSKNEIIRFEETLYGKSRLK-GGVAVGAAA 387


>Glyma11g34900.1 
          Length = 387

 Score =  333 bits (854), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 165/180 (91%), Positives = 169/180 (93%), Gaps = 1/180 (0%)

Query: 1   MGVYGPRTTYVLALKDFPGTHEFLLLDDGKWQHVKETTEIGEGKLFSPGNLRATSDNPDY 60
           MGV GPRTTYVLALKDFPGTHEFLLLD+GKWQHVKETTEIGEGKLFSPGNLRATSDNPDY
Sbjct: 209 MGVLGPRTTYVLALKDFPGTHEFLLLDEGKWQHVKETTEIGEGKLFSPGNLRATSDNPDY 268

Query: 61  DKLIHYYVREKYTLRYTGGMVPDVNQIIVKEKGIFTNVISPSSKAKLRLLFEVAPLGFLI 120
            KLI YYV EKYTLRYTGGMVPDVNQIIVKEKGIFTNV SPS+KAKLRLLFEVAPLGFLI
Sbjct: 269 AKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPSAKAKLRLLFEVAPLGFLI 328

Query: 121 EKAGGYSSDGHISVLDKEIKNLDDRTQVAYGSKNEIIRFEETLYGKSRLKTGGVPVGAAA 180
           EKAGGYSSDGH SVLDK I N+D+RTQVAYGSKNEIIRFEETLYGKSRLK  GV VGAAA
Sbjct: 329 EKAGGYSSDGHQSVLDKVITNIDERTQVAYGSKNEIIRFEETLYGKSRLKD-GVAVGAAA 387


>Glyma11g34920.1 
          Length = 181

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 54/102 (52%), Gaps = 26/102 (25%)

Query: 58  PDYDKLIHYYVREKYTLRYTGGMVPDVNQIIVKEKGIFTNVISPSSKAKLRLLFEVAPLG 117
           P    LI+YY REK  + Y   +                      S   LRL    APL 
Sbjct: 102 PRTTNLINYYAREKIIILYAFKV----------------------SYCCLRL----APLR 135

Query: 118 FLIEKAGGYSSDGHISVLDKEIKNLDDRTQVAYGSKNEIIRF 159
           FLIEKA GY+SD H SVLDK I N+D+ TQVAYGSKNEIIR 
Sbjct: 136 FLIEKAEGYNSDVHQSVLDKVITNIDEITQVAYGSKNEIIRL 177


>Glyma07g17180.1 
          Length = 408

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 72  YTLRYTGGMVPDVNQIIVKEKGIFTNVISPSSK-AKLRLLFEVAPLGFLIEKAGGYSSDG 130
           Y+ RY G +V D ++ ++   GI+       SK  KLRLL+E AP+ F++E+AGG  SDG
Sbjct: 316 YSARYIGSLVGDFHRTLLY-GGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDG 374

Query: 131 HISVLDKEIKNLDDRTQVAYGSKNEIIRFEETL 163
           H  +LD +   +  R  +  GS  E+ + E+ L
Sbjct: 375 HQRILDIQPTEIHQRVPLYIGSVEEVEKVEKYL 407


>Glyma18g41940.1 
          Length = 410

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)

Query: 72  YTLRYTGGMVPDVNQIIVKEKGIFTNVISPSSK-AKLRLLFEVAPLGFLIEKAGGYSSDG 130
           Y+ RY G +V D ++ ++   GI+       SK  KLRLL+E AP+ F++E+AGG  SDG
Sbjct: 318 YSARYIGSLVGDFHRTLLY-GGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDG 376

Query: 131 HISVLDKEIKNLDDRTQVAYGSKNEIIRFEETL 163
           H  +LD +   +  R  +  GS  E+ + E+ L
Sbjct: 377 HQRILDIQPTEIHQRVPLYIGSVEEVEKVEKYL 409


>Glyma08g19430.1 
          Length = 342

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 24/180 (13%)

Query: 3   VYGPRTTYVLALKDFPGTHEFLLLDD-GKWQHVKETTEI-GEGKLFS--PGNLRATSDNP 58
           +YG   T+VL+ ++  G + F L    G++       +I  +GK++S   GN R      
Sbjct: 169 MYGSSCTFVLSTEN--GVNGFTLDPSLGEFILTHPNIKIPSKGKIYSVNEGNAR------ 220

Query: 59  DYDKLIHYYVR---------EKYTLRYTGGMVPDVNQIIVKEKGIFT-NVISPSSKAKLR 108
           ++D+    YV+            +LRY G MV D+++ ++   GIF     + S   KLR
Sbjct: 221 NWDEPTTKYVQMCKFPQDGSPPKSLRYIGSMVADIHRTLLY-GGIFMYPADAKSPNGKLR 279

Query: 109 LLFEVAPLGFLIEKAGGYSSDGHISVLDKEIKNLDDRTQVAYGSKNEIIRFEETLYGKSR 168
           LL+EV P+ +L+E+AGG +  G    LD   K + +R+ V  GS ++I + +E LY  S+
Sbjct: 280 LLYEVFPMSYLMEQAGGQAFTGKQRALDLIPKKIHERSPVFLGSYDDIEQMKE-LYAASK 338


>Glyma10g36990.1 
          Length = 338

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 73  TLRYTGGMVPDVNQIIVKEKGIFTNVISPSSK----AKLRLLFEVAPLGFLIEKAGGYSS 128
           +LRY G MV DV++ ++   GIF   + P+ K     KLR+L+EV P+ FL+E+AGG + 
Sbjct: 244 SLRYIGSMVADVHRTLLY-GGIF---LYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAF 299

Query: 129 DGHISVLDKEIKNLDDRTQVAYGSKNEI 156
            G+   LD   K L +R+ +  GS  ++
Sbjct: 300 TGNQRALDLVPKKLHERSPIFLGSYEDV 327


>Glyma20g30620.1 
          Length = 339

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 8/88 (9%)

Query: 73  TLRYTGGMVPDVNQIIVKEKGIFTNVISPSSK----AKLRLLFEVAPLGFLIEKAGGYSS 128
           +LRY G MV DV++ ++   GIF   + P+ K     KLR+L+EV P+ FL+E+AGG + 
Sbjct: 244 SLRYIGSMVADVHRTLLY-GGIF---LYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAF 299

Query: 129 DGHISVLDKEIKNLDDRTQVAYGSKNEI 156
            G+   LD   K L +R+ +  GS  ++
Sbjct: 300 TGNQRALDLVPKKLHERSPIFLGSYEDV 327


>Glyma16g28310.1 
          Length = 342

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 8/88 (9%)

Query: 73  TLRYTGGMVPDVNQIIVKEKGIFTNVISPSSK----AKLRLLFEVAPLGFLIEKAGGYSS 128
           +LRY G MV DV++ ++   GIF   + P+ K     KLR+L+EV P+ FL+E+AGG S 
Sbjct: 244 SLRYIGSMVADVHRTLLY-GGIF---LYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQSF 299

Query: 129 DGHISVLDKEIKNLDDRTQVAYGSKNEI 156
            G    LD     L +R+ +  GS +++
Sbjct: 300 TGKERALDLVPTKLHERSPIFLGSYDDV 327