Jatropha Genome Database

JcCB0429731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429731.10 - phase: 0 
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g06770.1                                                       206   4e-54
Glyma01g01260.1                                                        68   3e-12
Glyma14g22210.1                                                        57   6e-09
Glyma06g09170.1                                                        50   4e-07

>Glyma14g06770.1 
          Length = 166

 Score =  206 bits (524), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 112/123 (91%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGERSWIKERLVCMDLTSYNYVYKMEASN 60
           MPMVERC+ L GD+  PGYVRLVSGFMFPQ+DGERSWIKERLV +D +S++YVY+MEASN
Sbjct: 39  MPMVERCSSLAGDDDEPGYVRLVSGFMFPQQDGERSWIKERLVSLDSSSHSYVYRMEASN 98

Query: 61  VGLDGSVNTLKLVDYGDDSTLVNWSFQIDPLEGASEDNIMDYLGFLYKSCINRIEAAIKA 120
           VGLDGSVN+LKLVDYGD+STL+ WSF+I+PLE  SED I+DYLGFLYKSCIN+IE AI+A
Sbjct: 99  VGLDGSVNSLKLVDYGDESTLIRWSFEINPLEDVSEDTIVDYLGFLYKSCINKIEGAIEA 158

Query: 121 ASK 123
           AS+
Sbjct: 159 ASR 161


>Glyma01g01260.1 
          Length = 173

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGERS--WIKERLVCMDLTSYNYVYKMEA 58
            P +  C  + G  G PG VR  +GF  P +DG+++  W K++L+ +D T   + Y +  
Sbjct: 45  FPTLSTCIPVEGISGQPGCVRFCAGFKTPVDDGKQTVNWTKQKLLSIDPTQRVFSYSIVD 104

Query: 59  SNVGLDGSVNTLKLVDYGDDSTLVNWSFQIDPLEGASEDNIMDYLGFLYKSCINRIEAAI 118
            NVG    V+TLK++   +    + W ++++P+EG   +++  ++    +    R++AA+
Sbjct: 105 GNVGFHSYVSTLKVLPMAEGCE-IEWLYEVEPVEGWKLEHLDSFIDTGLQVMAQRMQAAL 163

Query: 119 KA 120
           K 
Sbjct: 164 KT 165


>Glyma14g22210.1 
          Length = 166

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 2   PMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGERS--WIKERLVCMDLTSYNYVYKMEAS 59
           P +  C  + G  G PG +R  +G   P  +G  S  W KERLV +     +  Y+M  +
Sbjct: 40  PSLATCYGVHGSNGEPGCIRFCAGSSIPSSNGSGSVSWSKERLVAVHDVDLSLKYEMVDN 99

Query: 60  NVGLDGSVNTLK-LVDYGDDSTLVNWSFQIDPLEG 93
           N+G     +T++ L D   +  L+ WSF +DP++G
Sbjct: 100 NIGFRSYESTMRVLSDDDSNGCLLEWSFAVDPVKG 134


>Glyma06g09170.1 
          Length = 162

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 4   VERCTDLVGDEGVPGYVRLVSGFMFPQEDGERS----WIKERLVCMDLTSYNYVYKMEAS 59
           ++ C  + G  G PG +R  +  +      E++    W KE+++ +D       Y++  +
Sbjct: 41  LDTCYQVDGILGQPGLIRYCASTVEEGVGAEKTTTIKWAKEKILAIDPVQRCLTYEVVEN 100

Query: 60  NVGLDGSVNTLKLVDYGDDSTLVNWSFQIDPLEGASEDNIMDYLGFLYKSCINRIEAA 117
           N+G    V TLK++    D   + W F  DP+EG S   +  Y+    +S   +IE A
Sbjct: 101 NMGFKSYVATLKVLPIEGDGCKIEWGFVSDPVEGWSCQGLKSYVESTLQSMAKKIEFA 158