Jatropha Genome Database

JcCB0429541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429541.10 + phase: 0 /partial
         (298 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27500.1                                                       295   5e-80
Glyma15g11480.1                                                       272   3e-73

>Glyma13g27500.1 
          Length = 1455

 Score =  295 bits (754), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 156/304 (51%), Positives = 210/304 (69%), Gaps = 15/304 (4%)

Query: 1   VASQVQELIFEMIHKREEVRACRSVPYPCICFRPPYMCPSVTDEIQNFNPTQCT-ESSPT 59
           VASQVQ L+FEM+HKR+E+ A + VPYP +CF P + C SV D    F   QC  E SP 
Sbjct: 371 VASQVQGLLFEMLHKRDEILALKRVPYPSVCFTPSFACSSVFDGGSKFIQAQCNIEYSPP 430

Query: 60  PSTQ-MFVSQNISTTRGSNDASFDG---QINSSQTAAYFWVPFVNGPIISILDAAPLNLV 115
              Q +++SQ       SN  S +G   Q     T + FWVPFV GP++SILD +PL+L+
Sbjct: 431 QDAQNVWLSQ-------SNQRSSEGLNRQRGFQVTESSFWVPFVRGPVLSILDVSPLDLI 483

Query: 116 GRYMEEVFNAVREYRQRHLDS-SCDTWNEREPLFHLPHFPSLTESNSEVSKRNTPPAIST 174
            RY++++ +A +E+R+R+++S S D+  ++EPLF  P    + E+N E+S+     A++ 
Sbjct: 484 RRYVDDINSAAQEFRKRYIESGSSDSPVQKEPLF--PVSSPVAEANGEISRGTISRAVNA 541

Query: 175 GPTMPGQQLPKKTLAASIVENAKKQSVALVPKDISMLAQRFSSLFNPALFPHKPPPAAVA 234
                G+Q PKKTLAA +VE+ KKQS+ALV K+++ LAQRF +LFNPALFPHKPPPAAV 
Sbjct: 542 VSPSTGKQRPKKTLAAMLVESTKKQSIALVQKEVAKLAQRFLALFNPALFPHKPPPAAVV 601

Query: 235 NRVLFTDSEDELLALGIMEYNTDWKAIQQRFLPCKSKHQVVHIRVHNANTQPPLTSVKGD 294
           NR+LFTDSEDELLALGIMEYNTDWKAIQQRFLPCK+KHQ+   + +  +++     +K  
Sbjct: 602 NRILFTDSEDELLALGIMEYNTDWKAIQQRFLPCKTKHQIFVRQKNRCSSKASENPIKAV 661

Query: 295 RRRK 298
           RR K
Sbjct: 662 RRMK 665


>Glyma15g11480.1 
          Length = 1439

 Score =  272 bits (696), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 197/309 (63%), Gaps = 27/309 (8%)

Query: 1   VASQVQELIFEMIHKREEVRACRSVPYPCICFRPPYMCPSVTDEIQNFNPTQCT-ESSPT 59
           VASQVQ L+FEM+HKR+E+ A + VPYP +CF P + C SV+D    F   QC  E SP 
Sbjct: 368 VASQVQGLLFEMLHKRDEILALKRVPYPSVCFTPSFACSSVSDGGSKFVQDQCNIEYSPP 427

Query: 60  PSTQ--MFVSQNISTTRGSNDASFDGQINSSQTAAYFWVPFVNGPIISILDAAPLNLVGR 117
              Q   F   N  ++ G N      Q     T + FWVPFV GP+ SIL+A        
Sbjct: 428 QDAQNVWFSQSNQRSSEGLNR-----QRGFQATESSFWVPFVRGPVQSILEA-------- 474

Query: 118 YMEEVFNAVREYRQRHLDSSCDTWNEREPLFHLPHFPS-LTESNSEVSKRNTPPAISTGP 176
             E  F A +E+R+R+++S  D+  E+EPLF    F S + E+N E+S+     A++   
Sbjct: 475 LCEIPFTAAQEFRKRYIESGSDSPVEKEPLFT---FSSPVAEANGEISRGTISRAVNAVS 531

Query: 177 TMPGQQLPKKTLAASIVENAKKQSVALVPKDISMLAQRFSSLFNPALFPHKPPPAAVANR 236
           T   QQ PKKTLAA +VE+ KKQS+ALV K+++ LAQRF +LFNPALFPHKPPPAAV NR
Sbjct: 532 TSTRQQRPKKTLAAMLVESTKKQSIALVQKEVAKLAQRFLALFNPALFPHKPPPAAVVNR 591

Query: 237 VLFTDSEDE-------LLALGIMEYNTDWKAIQQRFLPCKSKHQVVHIRVHNANTQPPLT 289
           +LFTDSEDE       LLALGIMEYNTDWKAIQQRFLPCKSKHQ+   + ++ +++    
Sbjct: 592 ILFTDSEDEYVCDVDRLLALGIMEYNTDWKAIQQRFLPCKSKHQIFVRQKNHCSSKALEN 651

Query: 290 SVKGDRRRK 298
            +K  RR K
Sbjct: 652 PIKAVRRMK 660