Jatropha Genome Database

JcCB0429441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429441.10 + phase: 0 
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g12210.1                                                       138   1e-33
Glyma04g42550.4                                                       137   3e-33
Glyma04g42550.3                                                       137   3e-33
Glyma04g42550.1                                                       134   2e-32
Glyma04g42550.2                                                       134   2e-32
Glyma06g11980.1                                                        77   5e-15
Glyma04g42790.1                                                        75   2e-14
Glyma05g03440.2                                                        69   9e-13
Glyma05g03440.1                                                        69   1e-12
Glyma17g13990.1                                                        69   1e-12
Glyma16g22000.1                                                        59   1e-09
Glyma04g42550.5                                                        52   1e-07
Glyma15g38330.1                                                        50   5e-07
Glyma14g00610.1                                                        48   3e-06

>Glyma06g12210.1 
          Length = 342

 Score =  138 bits (348), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/68 (88%), Positives = 65/68 (95%)

Query: 1  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 60
          MAP+L +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 61 AIARQLFG 68
          AIA QLFG
Sbjct: 61 AIAHQLFG 68


>Glyma04g42550.4 
          Length = 342

 Score =  137 bits (344), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/68 (86%), Positives = 65/68 (95%)

Query: 1  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 60
          MAP+L ++QPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1  MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 61 AIARQLFG 68
          AIA QLFG
Sbjct: 61 AIAHQLFG 68


>Glyma04g42550.3 
          Length = 342

 Score =  137 bits (344), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/68 (86%), Positives = 65/68 (95%)

Query: 1  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 60
          MAP+L ++QPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1  MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 61 AIARQLFG 68
          AIA QLFG
Sbjct: 61 AIAHQLFG 68


>Glyma04g42550.1 
          Length = 364

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 65/68 (95%)

Query: 1  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 60
          MAP+L ++QPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1  MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 61 AIARQLFG 68
          AIA QLFG
Sbjct: 61 AIAHQLFG 68


>Glyma04g42550.2 
          Length = 294

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/68 (86%), Positives = 65/68 (95%)

Query: 1  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 60
          MAP+L ++QPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1  MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 61 AIARQLFG 68
          AIA QLFG
Sbjct: 61 AIAHQLFG 68


>Glyma06g11980.1 
          Length = 361

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/66 (46%), Positives = 43/66 (65%)

Query: 3  PVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAI 62
          P    + PWVEKYRP+ + DVA   ++V  +         PH+L YGPPGTGKT++ LA+
Sbjct: 32 PAAGKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAV 91

Query: 63 ARQLFG 68
          AR+L+G
Sbjct: 92 ARKLYG 97


>Glyma04g42790.1 
          Length = 363

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFG 68
          PWVEKYRP  + DVA   ++V  +         PH+L YGPPGTGKT++ LA+AR+L+G
Sbjct: 41 PWVEKYRPLSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYG 99


>Glyma05g03440.2 
          Length = 302

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFG 68
          PWVEKYRP +V D+   E+ V  L      G+ P+++  GPPGTGKTTS LA+A +L G
Sbjct: 13 PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 71


>Glyma05g03440.1 
          Length = 331

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFG 68
          PWVEKYRP +V D+   E+ V  L      G+ P+++  GPPGTGKTTS LA+A +L G
Sbjct: 13 PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 71


>Glyma17g13990.1 
          Length = 332

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFG 68
          PWVEKYRP +V D+   E+ V  L      G+ P+++  GPPGTGKTTS LA+A +L G
Sbjct: 14 PWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG 72


>Glyma16g22000.1 
          Length = 119

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLF 67
          PWVE YR   V ++   E+ V  L       + P+++ +GPPGTGKTTS +A+A +L 
Sbjct: 13 PWVENYRSSNVINIVDNEDTVSRLQVIARDDNMPNLILFGPPGTGKTTSIIALAHELL 70


>Glyma04g42550.5 
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/24 (91%), Positives = 23/24 (95%)

Query: 45 MLFYGPPGTGKTTSALAIARQLFG 68
          MLFYGPPGTGKTT+ALAIA QLFG
Sbjct: 1  MLFYGPPGTGKTTTALAIAHQLFG 24


>Glyma15g38330.1 
          Length = 126

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 32/59 (54%)

Query: 10 PWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSALAIARQLFG 68
          PWVEKY P +V D    E+ V  L       +  +++  GPP T KTTS LA+  +L G
Sbjct: 16 PWVEKYHPIKVADAVVNEDAVSRLQVIARNNNMHNLILSGPPRTIKTTSILALMHKLLG 74


>Glyma14g00610.1 
          Length = 513

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 9   QPWVEKYRPKQVKDVAHQEEVV---RVLTNTIETGDCPHMLFYGPPGTGKTTSALAI 62
           +P  E+ RP+ + DV  QE ++    +L + I+    P +L +GPPGTGKTT A AI
Sbjct: 102 EPLYERLRPRTLDDVVGQEHLLAPNSLLRSAIQRNRLPSILLWGPPGTGKTTIAKAI 158