Jatropha Genome Database

JcCB0428411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0428411.10 + phase: 0 /partial
         (355 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g03230.1                                                       552   e-157
Glyma01g09040.1                                                       167   2e-41
Glyma08g22870.1                                                       126   4e-29

>Glyma07g03230.1 
          Length = 519

 Score =  552 bits (1422), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/339 (79%), Positives = 298/339 (87%), Gaps = 8/339 (2%)

Query: 21  IHNLICF-----ENFLRKLEKELPGGRTHFVETSGLPISTYFSAMKILWLMENVDAVKLA 75
           +HN I +      +  R+LEKEL GGR HFVE+ GLPISTYFSA+K+LWLMENVDAVK A
Sbjct: 103 LHNAIVWMDARTSSICRRLEKELSGGRNHFVESCGLPISTYFSALKLLWLMENVDAVKEA 162

Query: 76  TKTGDALFGTVDTWLIWNLTGGVSGGLHVTDVSNASRTMLMNIKTLDWDKTTLQTLGIPA 135
            K  DALFGT+DTWLIWNLTGGV+GGLHVTDVSNASRTMLMN+KTLDWD +TL+TL IPA
Sbjct: 163 IKKKDALFGTIDTWLIWNLTGGVNGGLHVTDVSNASRTMLMNLKTLDWDASTLKTLNIPA 222

Query: 136 GILPKIVSNSEIIGNVGKGWPVLGVPIAGCLGDQHAAMVGQGCRKGEAKSTYGTGAFILL 195
            ILP IVSN+EIIG VG GWP+ GVPIAGCLGDQHAAM+GQ CRKGEAKSTYGTGAFILL
Sbjct: 223 EILPNIVSNAEIIGEVGSGWPIAGVPIAGCLGDQHAAMLGQSCRKGEAKSTYGTGAFILL 282

Query: 196 NTGEKIVKSNHGLLTTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDGLGIINVASESEV 255
           NTGE I++S HGLL+T+AFKLGPKAPTNYALEGS+AIAGAAVQWLRDGLGII+ A+E E 
Sbjct: 283 NTGEGIIQSKHGLLSTIAFKLGPKAPTNYALEGSVAIAGAAVQWLRDGLGIISSAAEIEE 342

Query: 256 LAKQVDSSGGVYFVPAFNGLFAPHWRDDARGVCVGITRFTTKAHIARAVLESMCFQVKDV 315
           +A QV+S+GGVYFVPAFNGLFAP WR+DARGVC+GITRFT+K HIARAVLESMCFQVKDV
Sbjct: 343 MALQVESTGGVYFVPAFNGLFAPWWREDARGVCIGITRFTSKGHIARAVLESMCFQVKDV 402

Query: 316 LDSMQKDTGEKGEQNNAKGEFLLRVDGGATVNNLLMQIQ 354
           LDSM KD+GE   Q   K EFLLRVDGGATVNNLLMQIQ
Sbjct: 403 LDSMHKDSGESESQ---KTEFLLRVDGGATVNNLLMQIQ 438


>Glyma01g09040.1 
          Length = 213

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 91/113 (80%), Gaps = 4/113 (3%)

Query: 227 EGSIAIAGAAVQWLRDGLGIINVASESEVLAKQVDSSGGVYFVPAFNGLFAPHWRDDARG 286
           E   AI G AVQWLRD LGII+ AS+ E +A QV+S+GGVYFVPAFNGLFAP WR+DAR 
Sbjct: 22  ELQFAITGDAVQWLRDSLGIISSASKIEEMALQVESTGGVYFVPAFNGLFAPWWREDARS 81

Query: 287 VCVGITRFTTKAHIARAVLESMCFQVKDVLDSMQKDTGEKGEQNNAKGEFLLR 339
           VC+GITRFT+KAHIARA LESMCFQVKDVLDSM KD+GE   + N    FLLR
Sbjct: 82  VCIGITRFTSKAHIARATLESMCFQVKDVLDSMHKDSGESESRKN----FLLR 130


>Glyma08g22870.1 
          Length = 204

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 93/158 (58%), Gaps = 35/158 (22%)

Query: 197 TGEKIVKSNHGLLTTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDGLGIINVASESEVL 256
           TGE I++S HGLL+T+AFKLGP APTNYALEGS+AIAGAAVQWLRD LGII+ ASE E +
Sbjct: 1   TGEGIIQSKHGLLSTVAFKLGPNAPTNYALEGSVAIAGAAVQWLRDSLGIISSASEIEEM 60

Query: 257 AKQVDSSGGVYFVPAFNGLFAPHWRDDARGVCVGITRFTTKAHIARAVLESMCFQVKDVL 316
           A QV+S+ GV+ V +     + H    AR                               
Sbjct: 61  ALQVESTVGVWIVCSMVYKQSSHCSSCAR------------------------------- 89

Query: 317 DSMQKDTGEKGEQNNAKGEFLLRVDGGATVNNLLMQIQ 354
           + +  ++GE   Q     + LLRVDGGA VNNLLMQIQ
Sbjct: 90  EHVFPNSGESESQK----KLLLRVDGGAAVNNLLMQIQ 123