Jatropha Genome Database

JcCB0428401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0428401.10 - phase: 0 
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g41940.1                                                       189   7e-49
Glyma07g17180.1                                                       182   8e-47
Glyma08g19430.1                                                        64   5e-11
Glyma16g28310.1                                                        64   7e-11
Glyma20g30620.3                                                        61   4e-10
Glyma20g30620.2                                                        61   5e-10
Glyma20g30620.1                                                        61   5e-10
Glyma10g36990.1                                                        60   6e-10
Glyma10g36990.2                                                        60   7e-10

>Glyma18g41940.1 
          Length = 410

 Score =  189 bits (481), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 95/122 (77%), Positives = 107/122 (87%), Gaps = 4/122 (3%)

Query: 25  PFQLCVFDTKTLVSFPSNHISKKKHVAG-GVKCMAVSTTSDAETKKKNMFEIQTLTNWLL 83
           PFQLCVFDTK ++S  S    +++HV G GV+CMAV   +  ETKK++ +E+QTLTNWLL
Sbjct: 26  PFQLCVFDTKQVLSSSSG---RRRHVGGSGVRCMAVGEAATTETKKRSGYELQTLTNWLL 82

Query: 84  KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQGEDQKKLDVVSN 143
           KQEQAGVIDAELTIVLSSISMACKQIASLVQRA+ISNLTGVQGAVNVQGEDQKKLDVVSN
Sbjct: 83  KQEQAGVIDAELTIVLSSISMACKQIASLVQRANISNLTGVQGAVNVQGEDQKKLDVVSN 142

Query: 144 EV 145
           EV
Sbjct: 143 EV 144


>Glyma07g17180.1 
          Length = 408

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 105/122 (86%), Gaps = 6/122 (4%)

Query: 25  PFQLCVFDTKTLVSFPSNHISKKKHVAG-GVKCMAVSTTSDAETKKKNMFEIQTLTNWLL 83
           PFQLCVFDTK ++S       +++HV G GV+CMAV   +   TKK++ +E+QTLT+WLL
Sbjct: 26  PFQLCVFDTKQVLS-----SGRRRHVGGSGVRCMAVGEAATTGTKKRSGYELQTLTSWLL 80

Query: 84  KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQGEDQKKLDVVSN 143
           KQEQAGVIDAELTIVLSSISMACKQIASLVQRA+ISNLTGVQGAVNVQGEDQKKLDVVSN
Sbjct: 81  KQEQAGVIDAELTIVLSSISMACKQIASLVQRANISNLTGVQGAVNVQGEDQKKLDVVSN 140

Query: 144 EV 145
           EV
Sbjct: 141 EV 142


>Glyma08g19430.1 
          Length = 342

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)

Query: 71  NMFEIQTLTNWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVN 129
           N  ++ T+T ++L +Q +      + TI+LS I + CK + S V +A ++ L G+ G  N
Sbjct: 8   NRTDLMTITRFVLNEQSKYPESRGDFTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETN 67

Query: 130 VQGEDQKKLDVVSNEV 145
           VQGE+QKKLDV+SNEV
Sbjct: 68  VQGEEQKKLDVLSNEV 83


>Glyma16g28310.1 
          Length = 342

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L +Q +      + TI+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCSAVSKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SNEV
Sbjct: 71  EEQKKLDVLSNEV 83


>Glyma20g30620.3 
          Length = 304

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L +Q +      + +I+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SN+V
Sbjct: 71  EEQKKLDVLSNDV 83


>Glyma20g30620.2 
          Length = 309

 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L +Q +      + +I+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SN+V
Sbjct: 71  EEQKKLDVLSNDV 83


>Glyma20g30620.1 
          Length = 339

 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLL-KQEQAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L +Q +      + +I+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SN+V
Sbjct: 71  EEQKKLDVLSNDV 83


>Glyma10g36990.1 
          Length = 338

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLLKQE-QAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L Q+        + +I+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNQQSNHPESRGDFSILLSHIVLGCKFLCSAVNKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SN+V
Sbjct: 71  EEQKKLDVLSNDV 83


>Glyma10g36990.2 
          Length = 319

 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)

Query: 74  EIQTLTNWLLKQE-QAGVIDAELTIVLSSISMACKQIASLVQRASISNLTGVQGAVNVQG 132
           ++ T+T ++L Q+        + +I+LS I + CK + S V +A ++ L G+ G  NVQG
Sbjct: 11  DLMTITRFVLNQQSNHPESRGDFSILLSHIVLGCKFLCSAVNKAGLAKLIGLAGETNVQG 70

Query: 133 EDQKKLDVVSNEV 145
           E+QKKLDV+SN+V
Sbjct: 71  EEQKKLDVLSNDV 83