Jatropha Genome Database

JcCB0426941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0426941.10 + phase: 0 
         (452 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g10540.1                                                       344   1e-94
Glyma02g34860.1                                                       317   2e-86

>Glyma10g10540.1 
          Length = 634

 Score =  344 bits (882), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/431 (49%), Positives = 274/431 (63%), Gaps = 52/431 (12%)

Query: 1   MAKDQSISVKDTVHKLQLSLLEGIKNEDQLFTAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           M KD+ +SVKD V KLQ+SLLEGI+NEDQLF AGSLMSRSDYED+VTERSI N+CGYPLC
Sbjct: 1   MEKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNVCGYPLC 60

Query: 61  NNSLPLDRPYKGRYRISLKEHKVYDLHETYMYCSSSCIVNSRAFAGSLQEERCSVLNPMK 120
           +N+LP DRP KGRYRISLKEHKVYDLHETYM+C S+C+V+S+AFAGSLQ ERCS L+  K
Sbjct: 61  SNALPSDRPRKGRYRISLKEHKVYDLHETYMFCCSNCVVSSKAFAGSLQAERCSGLDLEK 120

Query: 121 LDEILRMFNNLSLD-SKNLVENGDLGLSNLKIQEKIESNVGEVSLEEWIGPSNAIEGYVP 179
           L+ IL +F NL+L+ ++NL +N D GLS+LKIQEK E++ GEVSLE+W GPSNAIEGYVP
Sbjct: 121 LNNILSLFENLNLEPAENLQKNEDFGLSDLKIQEKTETSSGEVSLEQWAGPSNAIEGYVP 180

Query: 180 Q-RDRDFKGSSFKNPKEASKAISTKPVNKQECFFNDMDFMSTIITKDEYSISKA-PSGSI 237
           + RD D KG   KN K+A                 +M F+STII +D YS+SK  P+   
Sbjct: 181 KPRDHDSKGLR-KNVKKA-----------------EMGFVSTIIMQDGYSVSKVLPAIVK 222

Query: 238 STGS-DMKLQE------QRGKETHKGSEAQSSSPGKHAFVKTXXXXXXXXXXQIIKEELS 290
             G  D K+        Q    + K S    +S  +    ++            IK+   
Sbjct: 223 QLGKVDAKVVRKDDGSIQDLSSSFKSSLILGTSEKEEELAQSCEAALKSSPDCAIKK--- 279

Query: 291 DKDLLSASNYSQTGSSMNNAEPEEKSGAKQAANLSESMLKPSLKPSGAKKSVHSVTWADE 350
            KD+ S S       S    + E+   AK+      S+ K  ++ +G KK   +VTWAD+
Sbjct: 280 -KDVYSVS------ISERQCDVEQNDSAKK------SVQKFQVEKAGEKKLSRTVTWADK 326

Query: 351 KFDNAKSRNLCEVREMEDTKSGLEILDSLEN-----NNDNMLRFESAEACAIALSQAAEA 405
           K ++  S++LC  +   D ++     DS  N     N+++ LR  SAEAC IALS A+EA
Sbjct: 327 KINSTGSKDLCGFKNFGDIRNE---SDSAGNSIDVANDEDTLRRASAEACVIALSSASEA 383

Query: 406 VASGDADVNDA 416
           VASGD+DV+DA
Sbjct: 384 VASGDSDVSDA 394


>Glyma02g34860.1 
          Length = 709

 Score =  317 bits (811), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 156/250 (62%), Positives = 196/250 (78%), Gaps = 4/250 (1%)

Query: 1   MAKDQSISVKDTVHKLQLSLLEGIKNEDQLFTAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAKD+ +SVKD V KLQ+SLLEGI+NEDQLF AGSLMSRSDYED+VTERSI N+CGYPLC
Sbjct: 1   MAKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNMCGYPLC 60

Query: 61  NNSLPLDRPYKGRYRISLKEHKVYDLHETYMYCSSSCIVNSRAFAGSLQEERCSVLNPMK 120
           +N+LP DRP KGRYRISLKEHKVYDL ETYM+CSS+C+V+S+ FAGSLQ ERCS L+  K
Sbjct: 61  SNALPSDRPRKGRYRISLKEHKVYDLQETYMFCSSNCLVSSKTFAGSLQAERCSGLDLEK 120

Query: 121 LDEILRMFNNLSLDS-KNLVENGDLGLSNLKIQEKIESNVGEVSLEEWIGPSNAIEGYVP 179
           L+ +L +F NL+L+  + L +NGDLGLS+LKIQEK E + GEVSLE+W GPSNAIEGYVP
Sbjct: 121 LNNVLSLFENLNLEPVETLQKNGDLGLSDLKIQEKTERSSGEVSLEQWAGPSNAIEGYVP 180

Query: 180 Q-RDRDFKGSSFKNPKEASKAI--STKPVNKQECFFNDMDFMSTIITKDEYSISKAPSGS 236
           + R+RD KG      KE    I  + +P++      N+M F+STII +DEYS+SK P G 
Sbjct: 181 KPRNRDSKGLRKNVKKECPFIIMFNVRPMDVYGMTVNEMGFVSTIIMQDEYSVSKVPPGQ 240

Query: 237 ISTGSDMKLQ 246
           +   ++ +++
Sbjct: 241 MDATANHQIK 250



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 8/124 (6%)

Query: 298 SNYSQTGSSMNNAEPEEKSGAKQAANLSESMLKPSLKPSGAKKSVHSVTWADEKFDNAKS 357
           +N   + S+++ A  EEK   ++A    ++  + SLK +G KK   +VTWADEK ++  S
Sbjct: 349 ANDDASTSNLDPANVEEKFQVEKAGGSLKTKPRSSLKSAGEKKFSRTVTWADEKINSTGS 408

Query: 358 RNLCEVREMEDTKSGLEILDSLENNND-----NMLRFESAEACAIALSQAAEAVASGDAD 412
           ++LCE +E  D K      DS+ NN D     ++LR  SAEACAIALS A+EAVASGD+D
Sbjct: 409 KDLCEFKEFGDIKKE---SDSVGNNIDVANDEDILRRASAEACAIALSSASEAVASGDSD 465

Query: 413 VNDA 416
           V+DA
Sbjct: 466 VSDA 469