Jatropha Genome Database

JcCB0425751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0425751.10 + phase: 0 /partial/short
         (44 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09950.3                                                        91   3e-19
Glyma04g09950.1                                                        90   5e-19
Glyma04g09950.5                                                        90   5e-19
Glyma04g09950.4                                                        90   5e-19
Glyma04g09950.2                                                        87   5e-18
Glyma06g10000.1                                                        65   1e-11

>Glyma04g09950.3 
          Length = 518

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 43/44 (97%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DK+GFVW+TNYES+KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 395 MVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQ 438


>Glyma04g09950.1 
          Length = 550

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 43/44 (97%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DK+GFVW+TNYES+KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 395 MVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQ 438


>Glyma04g09950.5 
          Length = 535

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 43/44 (97%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DK+GFVW+TNYES+KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 395 MVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQ 438


>Glyma04g09950.4 
          Length = 535

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/44 (86%), Positives = 43/44 (97%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DK+GFVW+TNYES+KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 395 MVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQ 438


>Glyma04g09950.2 
          Length = 513

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/44 (86%), Positives = 43/44 (97%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DK+GFVW+TNYES+KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 358 MVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQ 401


>Glyma06g10000.1 
          Length = 526

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 35/44 (79%), Gaps = 6/44 (13%)

Query: 1   MVLLKGVDKDGFVWFTNYESRKAHELSENPRAALLFYWDGLNRQ 44
           MVLLKG+DKD FV       +KA ELSENPRA+LLFYWDGLNRQ
Sbjct: 412 MVLLKGLDKDRFV------CQKACELSENPRASLLFYWDGLNRQ 449