Jatropha Genome Database

JcCB0424661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0424661.10 + phase: 2 /pseudo/partial
         (338 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07220.1                                                       312   4e-85
Glyma13g32970.2                                                       259   4e-69
Glyma13g32970.1                                                       258   4e-69
Glyma06g19460.1                                                       130   2e-30
Glyma04g35330.1                                                       116   3e-26
Glyma07g30100.1                                                        70   4e-12

>Glyma08g07220.1 
          Length = 674

 Score =  312 bits (799), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 169/321 (52%), Positives = 212/321 (66%), Gaps = 5/321 (1%)

Query: 23  ATSRLNPPGPTEGKSDLFVVXXXXXXXXXXXXXXXXLAEGLPGFQNILRDMIPGMKLKVL 82
           A  RL+    TE KS+LFVV                 AEG+PGFQN+L+DMIPG+K+KV 
Sbjct: 268 AAGRLSSVESTEDKSELFVVSTEDPENGNDRNDGSDPAEGMPGFQNVLKDMIPGVKVKVF 327

Query: 83  KVTTPAKVDKDF---ISKVIXXXXXXXXXXXXXXXXXXXGD-DELGSESDQXXXXXXXXX 138
           KV TP KVDKD    I K+I                    + +E+ SE+DQ         
Sbjct: 328 KVITPEKVDKDLSNVIEKIIEDEDGDEDEDEEMENDAESLELEEIKSETDQEGDDEIEIN 387

Query: 139 XXX-XXXSEGPSEISFKVVVGGLAQKFSGSMPVKESLRVPAKLEKKGRRSFLFSIEKDVN 197
                   E  +E + K+ +GGL QK SG++  ++ LRVPA LE KGR SF F++EK+VN
Sbjct: 388 AGLGTFEREDQNEFAVKIAIGGLVQKLSGNLSSRDLLRVPAMLEMKGRGSFSFTVEKEVN 447

Query: 198 QQDSGAKEAASADRKAKFQGQRSVDNIMLDLAKFIGKEKIPLKVLKDVGDLINFTLSQAQ 257
           QQ    K  +S+D+  KFQG+R VD+++ DLAKFIG+ KIP KVLK+VG+LIN TLSQAQ
Sbjct: 448 QQVGLDKGKSSSDKSTKFQGRRRVDHVIFDLAKFIGRGKIPSKVLKEVGELINLTLSQAQ 507

Query: 258 NRQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEVIQLQRKFGQWQDERGTNQPSNV 317
           +   LSGST F+RIEI AS DPLNGLYIGAHGLYSSEVI L+R+FGQWQ++ G  +PSN+
Sbjct: 508 SHHQLSGSTIFNRIEIPASFDPLNGLYIGAHGLYSSEVIHLRRRFGQWQEDNGAKEPSNI 567

Query: 318 EFYEYVEAVKLTGDPYIAAGQ 338
           EFYEYVEA+KLTGDPY+ AGQ
Sbjct: 568 EFYEYVEALKLTGDPYVPAGQ 588


>Glyma13g32970.2 
          Length = 631

 Score =  259 bits (661), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/325 (46%), Positives = 190/325 (58%), Gaps = 9/325 (2%)

Query: 19  KAPGATSRLNPPGPTEGKSDLFVVXXXXXXXXXXXXXXXXLAEGLPGFQNILRDMIPGMK 78
           KA  A  RL      E +S+L V                  +E +PGFQN+L+D IPG+K
Sbjct: 226 KALDAAERLRSVESPEDRSELVVGSPEDPEVVDDRNDNSDPSEAMPGFQNVLKDTIPGVK 285

Query: 79  LKVLKVTTPAKVDKDFISKVIXXXXXXXXXXXXXXXXXXXGDDE-----LGSESDQXXXX 133
           +KVLKVTTP KVD D ISKVI                    D+E     L     +    
Sbjct: 286 MKVLKVTTPDKVDNDTISKVIEQITDDEGNEDEDSDECAGKDNETENPELSDIKTETDDE 345

Query: 134 XXXXXXXXXXXSEGPSEISFKVVVGGLAQKFSGSMPVKESLRVPAKLEKKGRRSFLFSIE 193
                       E  ++I+ KV+VGGL QK   S+  +  LRVPAKLEK G+ SF  + E
Sbjct: 346 IELNSSVESFEREEQNKIAVKVIVGGLVQKLPSSLTTRNLLRVPAKLEKTGQGSFSLTFE 405

Query: 194 KDVNQQDSGAKEAASADRKAKFQGQRSVDNIMLDLAKFIGKEKIPLKVLKDVGDLINFTL 253
           K  NQQ    K   S+D+  K Q Q SVD +M++LAK IG+ K    VLKD+G+LI+ +L
Sbjct: 406 KVANQQVGHGKGKPSSDKSTKIQRQNSVDGVMVNLAKLIGRGK----VLKDLGELISLSL 461

Query: 254 SQAQNRQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEVIQLQRKFGQWQDERGTNQ 313
           S+A N + LSGST F RIEI  S DPLNGLYIGAHGLYSSEVIQL+ ++GQWQ++ G  +
Sbjct: 462 SRAWNHERLSGSTMFSRIEIPTSLDPLNGLYIGAHGLYSSEVIQLRCRYGQWQEDGGPKE 521

Query: 314 PSNVEFYEYVEAVKLTGDPYIAAGQ 338
           PS++EF EYVEA+KLTGD Y+  GQ
Sbjct: 522 PSDLEFCEYVEALKLTGDSYVPVGQ 546


>Glyma13g32970.1 
          Length = 632

 Score =  258 bits (660), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/325 (46%), Positives = 190/325 (58%), Gaps = 9/325 (2%)

Query: 19  KAPGATSRLNPPGPTEGKSDLFVVXXXXXXXXXXXXXXXXLAEGLPGFQNILRDMIPGMK 78
           KA  A  RL      E +S+L V                  +E +PGFQN+L+D IPG+K
Sbjct: 226 KALDAAERLRSVESPEDRSELVVGSPEDPEVVDDRNDNSDPSEAMPGFQNVLKDTIPGVK 285

Query: 79  LKVLKVTTPAKVDKDFISKVIXXXXXXXXXXXXXXXXXXXGDDE-----LGSESDQXXXX 133
           +KVLKVTTP KVD D ISKVI                    D+E     L     +    
Sbjct: 286 MKVLKVTTPDKVDNDTISKVIEQITDDEGNEDEDSDECAGKDNETENPELSDIKTETDDE 345

Query: 134 XXXXXXXXXXXSEGPSEISFKVVVGGLAQKFSGSMPVKESLRVPAKLEKKGRRSFLFSIE 193
                       E  ++I+ KV+VGGL QK   S+  +  LRVPAKLEK G+ SF  + E
Sbjct: 346 IELNSSVESFEREEQNKIAVKVIVGGLVQKLPSSLTTRNLLRVPAKLEKTGQGSFSLTFE 405

Query: 194 KDVNQQDSGAKEAASADRKAKFQGQRSVDNIMLDLAKFIGKEKIPLKVLKDVGDLINFTL 253
           K  NQQ    K   S+D+  K Q Q SVD +M++LAK IG+ K    VLKD+G+LI+ +L
Sbjct: 406 KVANQQVGHGKGKPSSDKSTKIQRQNSVDGVMVNLAKLIGRGK----VLKDLGELISLSL 461

Query: 254 SQAQNRQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEVIQLQRKFGQWQDERGTNQ 313
           S+A N + LSGST F RIEI  S DPLNGLYIGAHGLYSSEVIQL+ ++GQWQ++ G  +
Sbjct: 462 SRAWNHERLSGSTMFSRIEIPTSLDPLNGLYIGAHGLYSSEVIQLRCRYGQWQEDGGPKE 521

Query: 314 PSNVEFYEYVEAVKLTGDPYIAAGQ 338
           PS++EF EYVEA+KLTGD Y+  GQ
Sbjct: 522 PSDLEFCEYVEALKLTGDSYVPVGQ 546


>Glyma06g19460.1 
          Length = 513

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 141/285 (49%), Gaps = 24/285 (8%)

Query: 61  EGLPGFQNILRDMIPGMKLKVLKVTTP--AKVDKDFISKVIXXXXXXXXXXXXXXXXXXX 118
           EG+    N L++ IPG+K+KV+ V+    A  + D I +++                   
Sbjct: 155 EGIKSVINFLKEKIPGLKIKVMNVSVEEEAAENNDSIKQLMEEDSNKTGSSENHEEEVNN 214

Query: 119 GD--DELGSESDQXXXXXXXXXXXXXXXSEGPSEISFKVVVGGLAQKFSGSMPVK-ESLR 175
            D  D +  E D                +E   ++  K+++GG+    +   PVK E +R
Sbjct: 215 LDEPDAVTLERD-------------GDATEEEKDLEMKLLIGGVVHN-NEDTPVKDEFIR 260

Query: 176 VPAKLEKKGRRSFLFSIEKDVNQQDSGAKEAASADRKAKFQGQRSVDNIML-DLAK-FIG 233
           +PA+++   + SF+F    D    D G KE    + K      + V  +M  D+A  F  
Sbjct: 261 LPAEIKNMEKDSFVFHF--DCGNVDYGIKEDKIPNIKVAALAAQGVSELMPPDVANAFWS 318

Query: 234 KEKIPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEIS-ASPDPLNGLYIGAHGLYS 292
            +K+  K+ K + D++   +SQAQ R  LSG T F RI  S    DP +GLY+GA G Y 
Sbjct: 319 SDKVSSKISKSMRDIVRVAMSQAQKRTKLSGDTNFSRIICSRGDSDPFDGLYVGAFGPYG 378

Query: 293 SEVIQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDPYIAAG 337
            E++ L+RKFG W +    N+ S+V F+EYVEAVKLTGD  + AG
Sbjct: 379 MEIVHLRRKFGHWNEVDNENKTSDVGFFEYVEAVKLTGDLNVPAG 423


>Glyma04g35330.1 
          Length = 632

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 137/286 (47%), Gaps = 24/286 (8%)

Query: 61  EGLPGFQNILRDMIPGMKLKVLKVTTP--AKVDKDFISKVIXXXXXXXXXXXXXXXXXXX 118
           EG+    N L++ IPG+K+KV+ V     A  + D I +++                   
Sbjct: 274 EGIKSVINFLKEKIPGLKVKVMNVNVEEEAAENNDSIKQLMEEDSNESGSSENHEEEVNN 333

Query: 119 GD--DELGSESDQXXXXXXXXXXXXXXXSEGPSEISFKVVVGGLAQKFSGSMPVK-ESLR 175
            D  D +  E D                +E   +   K+ +GG+    +   PVK E +R
Sbjct: 334 LDEPDAVTLERD-------------GDVTEEEKDFEMKLFIGGVVHN-NEDTPVKDEFIR 379

Query: 176 VPAKLEKKGRRSFLFSIEKDVNQQDSGAKEAASADRKAKFQGQRSVDNIML-DLAK-FIG 233
           +PA+++   + SF+F         D G KE    + K      + +  +M  D+A  F  
Sbjct: 380 LPAEIKNIEKDSFVFHFAS--GNVDYGIKEDKIPNIKVAALAAQGISELMPPDVANAFWS 437

Query: 234 KEKIPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEIS-ASPDPLNGLYIGAHGLYS 292
            +K+  KV K + D++   +SQAQ R  LSG T F RI  S    DP +GLY+GA G Y 
Sbjct: 438 SDKVSSKVSKSMRDIVRVAMSQAQKRTRLSGDTNFSRIICSRGDSDPFDGLYVGAFGPYG 497

Query: 293 SEVIQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDPYIAAGQ 338
            E++ L+RKFG W +    N  S+V F+EYVEAVKLTGD  + AGQ
Sbjct: 498 MEIVHLRRKFGHWNEVNNENNTSDVGFFEYVEAVKLTGDLNVPAGQ 543


>Glyma07g30100.1 
          Length = 695

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 2   CTXKGKAFSKILQQSPLKAPGATSRLNPPGPTEGKSDLFVVXXXXXXXXXXXXXXXXLAE 61
           C+ +  AF      S     GA  RL+    TE KS+L+VV                 AE
Sbjct: 263 CSRRRGAFHGPPTNSSKTLDGA-GRLSSVESTEDKSELYVVSTEDPENDDDRNDGSDPAE 321

Query: 62  GLPGFQNILRDMIPGMKLKVLKVTTPAKVDKDFISKVI 99
           G+PGFQN+L+DMIPG+K+KV KV TP KVDKD IS VI
Sbjct: 322 GMPGFQNVLKDMIPGVKVKVFKVITPDKVDKD-ISNVI 358