Jatropha Genome Database

JcCB0424591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0424591.10 - phase: 0 /partial
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g34670.1                                                       105   9e-24
Glyma20g32890.1                                                       102   7e-23
Glyma19g37700.3                                                        98   2e-21
Glyma03g35000.3                                                        97   3e-21
Glyma19g37700.2                                                        96   1e-20
Glyma03g35000.2                                                        95   1e-20
Glyma19g37700.1                                                        91   2e-19
Glyma03g35000.1                                                        91   3e-19
Glyma11g19310.1                                                        86   1e-17
Glyma12g09160.1                                                        86   1e-17

>Glyma10g34670.1 
          Length = 172

 Score =  105 bits (263), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 59/82 (71%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           S+ AISTFQ+                 LQLGRAEEETRRL  IWEELEV+ DPMRKEVAM
Sbjct: 37  SKLAISTFQSKEEEIERKKTEVREKVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAM 96

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRKKIDLAN++LKPLG + QKK
Sbjct: 97  VRKKIDLANKDLKPLGLNFQKK 118


>Glyma20g32890.1 
          Length = 159

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 57/82 (69%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           S+  ISTFQ+                  QLGRAEEETRRL  IWEELEV+ DPMRKEVAM
Sbjct: 24  SKLTISTFQSKEEEIERKKMEVREKVEFQLGRAEEETRRLAHIWEELEVLDDPMRKEVAM 83

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRKKIDLAN++LKPLG + QKK
Sbjct: 84  VRKKIDLANKDLKPLGLNFQKK 105


>Glyma19g37700.3 
          Length = 127

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 57/85 (67%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A+STF+A                 LQLGR EEET+RL  I EELE + DPMRKEVA+
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVAL 91

Query: 87  VRKKIDLANRELKPLGQSCQKKVSY 111
           VRK+ID  N+ELKPLG +CQKKV +
Sbjct: 92  VRKRIDSVNKELKPLGHTCQKKVKF 116


>Glyma03g35000.3 
          Length = 127

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 57/85 (67%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A+STF+A                 LQLGR EEET+RL  I EELE + DPMRKEVA+
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVAL 91

Query: 87  VRKKIDLANRELKPLGQSCQKKVSY 111
           VRK+ID  N+ELKPLG +CQKKV +
Sbjct: 92  VRKRIDSVNKELKPLGHTCQKKVKF 116


>Glyma19g37700.2 
          Length = 164

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 55/82 (67%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A+STF+A                 LQLGR EEET+RL  I EELE + DPMRKEVA+
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVAL 91

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRK+ID  N+ELKPLG +CQKK
Sbjct: 92  VRKRIDSVNKELKPLGHTCQKK 113


>Glyma03g35000.2 
          Length = 164

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 55/82 (67%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A+STF+A                 LQLGR EEET+RL  I EELE + DPMRKEVA+
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVAL 91

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRK+ID  N+ELKPLG +CQKK
Sbjct: 92  VRKRIDSVNKELKPLGHTCQKK 113


>Glyma19g37700.1 
          Length = 167

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQI---WEELEVMCDPMRKE 83
           SR A+STF+A                 LQLGR EEET+RL  I   ++ELE + DPMRKE
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREEYQELEALADPMRKE 91

Query: 84  VAMVRKKIDLANRELKPLGQSCQKK 108
           VA+VRK+ID  N+ELKPLG +CQKK
Sbjct: 92  VALVRKRIDSVNKELKPLGHTCQKK 116


>Glyma03g35000.1 
          Length = 167

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQI---WEELEVMCDPMRKE 83
           SR A+STF+A                 LQLGR EEET+RL  I   ++ELE + DPMRKE
Sbjct: 32  SRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREEYQELEALADPMRKE 91

Query: 84  VAMVRKKIDLANRELKPLGQSCQKK 108
           VA+VRK+ID  N+ELKPLG +CQKK
Sbjct: 92  VALVRKRIDSVNKELKPLGHTCQKK 116


>Glyma11g19310.1 
          Length = 210

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 54/82 (65%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A++ F+A                   LGR EEET+RL +I EELE + DP+RKEVA+
Sbjct: 78  SRSALAMFRAKEEEIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAI 137

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRKKID  N+ELKPLGQ+CQ+K
Sbjct: 138 VRKKIDSVNKELKPLGQTCQRK 159


>Glyma12g09160.1 
          Length = 176

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 54/82 (65%)

Query: 27  SRFAISTFQAXXXXXXXXXXXXXXXXXLQLGRAEEETRRLTQIWEELEVMCDPMRKEVAM 86
           SR A++ F+A                   LGR EEET+RL +I EELE + DP+RKEVA+
Sbjct: 44  SRSALAMFRAKEEEIERRKVEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAI 103

Query: 87  VRKKIDLANRELKPLGQSCQKK 108
           VRKKID  N+ELKPLGQ+CQ+K
Sbjct: 104 VRKKIDSVNKELKPLGQTCQRK 125