Jatropha Genome Database

JcCB0423721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0423721.10 + phase: 0 /partial
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32360.1                                                        90   9e-19

>Glyma19g32360.1 
          Length = 1076

 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 56/88 (63%)

Query: 51  KFESIMSEYGMQISRILLSQLHCADEDXXXXXXCILKKSIFKPNYSSGKDLTDSRQMDVX 110
           +FES++SE+GM IS IL+ QL+C DED       I K  I +P+YS    LTD+RQ +  
Sbjct: 364 RFESMVSEFGMNISCILVPQLNCTDEDVIVGVVSIFKAIILRPDYSQEDALTDNRQANSV 423

Query: 111 XXXXXXXXDENDGIARAVVMLIAEYCSM 138
                   DE DG A+AVVMLIAEYCSM
Sbjct: 424 IPFLLHLLDEQDGTAKAVVMLIAEYCSM 451