Jatropha Genome Database
- JcCB0421511.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0421511.10 + phase: 1 /pseudo/partial
(162 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g38140.1 128 3e-30
Glyma04g37370.1 127 7e-30
Glyma08g01470.1 121 4e-28
Glyma06g17720.1 101 4e-22
Glyma05g32930.1 78 5e-15
Glyma08g00560.3 77 6e-15
Glyma08g00560.1 77 6e-15
Glyma04g38480.1 67 8e-12
Glyma08g00560.2 66 2e-11
Glyma06g16570.1 65 5e-11
>Glyma05g38140.1
Length = 545
Score = 128 bits (321), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/82 (74%), Positives = 69/82 (84%)
Query: 30 LKLKTRRAGCTVFTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSD 89
KL+ R+ FTCDTRSL ++ITSI+QR+GDDID NLPQILYEDED+DKVVL SDSD
Sbjct: 414 FKLQDRKGRLHRFTCDTRSLAEVITSIVQRVGDDIDPMNLPQILYEDEDNDKVVLASDSD 473
Query: 90 LVTAVDHAKSAGLKGLRLHLDY 111
L AVDHAK+AGLKGLRLHLDY
Sbjct: 474 LAAAVDHAKTAGLKGLRLHLDY 495
>Glyma04g37370.1
Length = 526
Score = 127 bits (318), Expect = 7e-30, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 30 LKLKTRRAGCTVFTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSD 89
K++ ++ FTCDTRS+ ++ITSILQRLGDDID NN+PQILYEDEDHDKVVL SDSD
Sbjct: 398 FKIQDKKGRMHRFTCDTRSMMEVITSILQRLGDDIDPNNIPQILYEDEDHDKVVLASDSD 457
Query: 90 LVTAVDHAKSAGLKGLRLHLDY 111
L AVDHA++AGLKGL+LHLDY
Sbjct: 458 LAAAVDHARTAGLKGLKLHLDY 479
>Glyma08g01470.1
Length = 470
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 70/87 (80%)
Query: 25 QIRLVLKLKTRRAGCTVFTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVL 84
Q KL+ R+ FTCDTRSL ++ITS++QR+GDDID +LPQILYEDE++DKVVL
Sbjct: 334 QNAFSFKLQDRKGRLHRFTCDTRSLAEVITSVIQRVGDDIDPMDLPQILYEDEENDKVVL 393
Query: 85 ESDSDLVTAVDHAKSAGLKGLRLHLDY 111
SDSDL AVDHAK+AGLKGLRLHLDY
Sbjct: 394 ASDSDLAAAVDHAKTAGLKGLRLHLDY 420
>Glyma06g17720.1
Length = 404
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Query: 22 RGCQIRLVLKLKTRRAGCT-VFTCDTRSLTDLITSILQRLGDDIDRNNLPQIL------- 73
+ C I L K K RRA CT + T S+T++ITS+LQRLGDDID NN+PQIL
Sbjct: 314 QACPIHLTSKYKIRRAECTDSYVVYTWSMTEVITSVLQRLGDDIDPNNIPQILESWPYLP 373
Query: 74 -YEDEDHDKVVLESDSDLVTAVDHAKSAGLK 103
YEDEDHDKVVL SDSDL AVDHA++A LK
Sbjct: 374 LYEDEDHDKVVLASDSDLAPAVDHARTADLK 404
>Glyma05g32930.1
Length = 535
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 4/71 (5%)
Query: 42 FTCDTRSLTDLITSILQRLG-DDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSA 100
F C T + +L+++I+QRL +D++R P ILYED++ DK+VL +DSDLV+AV +A SA
Sbjct: 419 FNCGTEHIDELVSTIMQRLDVNDVER---PMILYEDDEGDKIVLATDSDLVSAVSYATSA 475
Query: 101 GLKGLRLHLDY 111
G+K L+LHLD+
Sbjct: 476 GMKALKLHLDF 486
>Glyma08g00560.3
Length = 535
Score = 77.4 bits (189), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 42 FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
F C T L +L+++I+QRL D++ P ILYED++ DK+VL ++SDLV+AV +A+SAG
Sbjct: 419 FNCGTEHLDELVSTIMQRL--DVNDGERPIILYEDDEGDKIVLATNSDLVSAVSYARSAG 476
Query: 102 LKGLRLHLDY 111
+K L+LHLD+
Sbjct: 477 VKALKLHLDF 486
>Glyma08g00560.1
Length = 537
Score = 77.4 bits (189), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/70 (51%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 42 FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
F C T L +L+++I+QRL D++ P ILYED++ DK+VL ++SDLV+AV +A+SAG
Sbjct: 421 FNCGTEHLDELVSTIMQRL--DVNDGERPIILYEDDEGDKIVLATNSDLVSAVSYARSAG 478
Query: 102 LKGLRLHLDY 111
+K L+LHLD+
Sbjct: 479 VKALKLHLDF 488
>Glyma04g38480.1
Length = 523
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 42 FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
F C +L+++++QR+GD ++ P +LY+D+D DK+++ +D+DLV AV +A+SAG
Sbjct: 406 FYCGAEHQEELLSAVMQRIGD-VNDGEHPTMLYKDDDGDKIIIATDNDLVAAVSYARSAG 464
Query: 102 LKGLRLHLDY 111
LK L+L L++
Sbjct: 465 LKALKLDLEF 474
>Glyma08g00560.2
Length = 499
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 42 FTCDTRSLTDLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAG 101
F C T L +L+++I+QRL D++ P ILYED++ DK+VL ++SDLV+AV +A+SAG
Sbjct: 419 FNCGTEHLDELVSTIMQRL--DVNDGERPIILYEDDEGDKIVLATNSDLVSAVSYARSAG 476
Query: 102 LK 103
+K
Sbjct: 477 VK 478
>Glyma06g16570.1
Length = 521
Score = 64.7 bits (156), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 51 DLITSILQRLGDDIDRNNLPQILYEDEDHDKVVLESDSDLVTAVDHAKSAGLKGLRLHLD 110
+L+++++QR+GD I+ P +LY+D+D DK+++ +D+DLV AV +A+SAGLK L+L L+
Sbjct: 413 ELLSAVMQRIGD-INDGEHPTMLYKDDDGDKIIIATDNDLVAAVSYARSAGLKALKLDLE 471
Query: 111 Y 111
+
Sbjct: 472 F 472