Jatropha Genome Database

JcCB0418191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0418191.10 + phase: 0 /pseudo/partial
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g13910.1                                                       148   3e-36
Glyma15g13910.2                                                       147   4e-36
Glyma08g08630.1                                                       144   4e-35
Glyma09g02960.1                                                       144   6e-35
Glyma13g27430.1                                                       130   5e-31
Glyma20g02790.1                                                        72   3e-13

>Glyma15g13910.1 
          Length = 471

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 79/95 (83%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QNSEAMISIDMPAGPSEVLVIADKHA P H+AADLLSQAEHGPDSQ             A
Sbjct: 255 QNSEAMISIDMPAGPSEVLVIADKHAIPSHVAADLLSQAEHGPDSQVVLVIVGDGVDLNA 314

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           I+EE+SKQC+SLPRGE+ASKALSHSF V+ARDM+E
Sbjct: 315 IQEELSKQCESLPRGEFASKALSHSFFVYARDMLE 349


>Glyma15g13910.2 
          Length = 382

 Score =  147 bits (372), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 79/95 (83%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QNSEAMISIDMPAGPSEVLVIADKHA P H+AADLLSQAEHGPDSQ             A
Sbjct: 255 QNSEAMISIDMPAGPSEVLVIADKHAIPSHVAADLLSQAEHGPDSQVVLVIVGDGVDLNA 314

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           I+EE+SKQC+SLPRGE+ASKALSHSF V+ARDM+E
Sbjct: 315 IQEELSKQCESLPRGEFASKALSHSFFVYARDMLE 349


>Glyma08g08630.1 
          Length = 436

 Score =  144 bits (363), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 77/95 (81%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QNSEAM+SIDMPAGPSEVLVIADKHA P H+AADLLSQAEHGPDSQ              
Sbjct: 220 QNSEAMVSIDMPAGPSEVLVIADKHAIPRHVAADLLSQAEHGPDSQVVLVISGEGVDLNV 279

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           IEEE++KQCQSLPRGE+A+KALSHSF V+A DM+E
Sbjct: 280 IEEELNKQCQSLPRGEFAAKALSHSFIVYAHDMLE 314


>Glyma09g02960.1 
          Length = 473

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 71/95 (74%), Positives = 77/95 (81%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QNSEAMISIDMPAGPSEVLVIADKHA P H+AADLLSQAEHGPDSQ             A
Sbjct: 257 QNSEAMISIDMPAGPSEVLVIADKHAIPSHVAADLLSQAEHGPDSQVVLVIAGDGVDLNA 316

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           I+EE+SKQC SLPRGE+ASKALSHSF V+A DM+E
Sbjct: 317 IQEELSKQCDSLPRGEFASKALSHSFFVYACDMLE 351


>Glyma13g27430.1 
          Length = 355

 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/95 (67%), Positives = 71/95 (74%)

Query: 30  QNSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQAEHGPDSQXXXXXXXXXXXXKA 89
           QN EAM+SI MPA PSEVLVIADKH  P H+AADL SQ EHGPDSQ             A
Sbjct: 183 QNIEAMVSIGMPASPSEVLVIADKHVVPRHVAADLHSQVEHGPDSQVVPVISGEGVDLNA 242

Query: 90  IEEEISKQCQSLPRGEYASKALSHSFTVFARDMVE 124
           IEEE+SKQCQ LPRGE+A+KALSHSF V+A DM+E
Sbjct: 243 IEEELSKQCQRLPRGEFAAKALSHSFIVYAHDMLE 277


>Glyma20g02790.1 
          Length = 73

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/37 (91%), Positives = 35/37 (94%)

Query: 31 NSEAMISIDMPAGPSEVLVIADKHASPVHIAADLLSQ 67
          NSEAMISIDMPAGPSEVLVIADKHA P H+AADLLSQ
Sbjct: 1  NSEAMISIDMPAGPSEVLVIADKHAIPSHVAADLLSQ 37