Jatropha Genome Database

JcCB0403471.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0403471.20 + phase: 0 /partial
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g00260.2                                                       214   8e-56
Glyma09g00260.1                                                       214   8e-56
Glyma09g00260.3                                                       214   9e-56
Glyma17g20020.1                                                       203   1e-52
Glyma11g05960.1                                                       198   5e-51
Glyma12g36920.1                                                       190   1e-48
Glyma01g39310.1                                                       162   2e-40

>Glyma09g00260.2 
          Length = 477

 Score =  214 bits (544), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 142/213 (66%), Gaps = 3/213 (1%)

Query: 13  RYKNCNGILDFRSKTSNPRKYTVRC--DYDEDFCKERYENKR-FRMXXXXXXXXXXXXXX 69
           RY+   G      K S  R Y++R     +E       E KR  R+              
Sbjct: 21  RYRYDYGYPHHHDKISKHRYYSIRVVDSGNEMVLSNLEEEKRKLRVLVAGGGIGGLVLAL 80

Query: 70  XXKHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDR 129
             KH+G++VKVFEKDLSAVRGEG+HRGPI            ID+ VA QIMEAGCVT +R
Sbjct: 81  AAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALAVLETIDQSVARQIMEAGCVTANR 140

Query: 130 INGLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDF 189
            NGLADG+SG+WF+ FDL TPA ++ LP+T VICRMALQDIL+N VG +I+ NKSKVVDF
Sbjct: 141 TNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMALQDILVNKVGSNIIRNKSKVVDF 200

Query: 190 IEDSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           I++ +KV VILE+G +++GD+L+GADGIWS+VR
Sbjct: 201 IQEPNKVRVILENGEQHDGDILIGADGIWSEVR 233


>Glyma09g00260.1 
          Length = 478

 Score =  214 bits (544), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 142/213 (66%), Gaps = 3/213 (1%)

Query: 13  RYKNCNGILDFRSKTSNPRKYTVRC--DYDEDFCKERYENKR-FRMXXXXXXXXXXXXXX 69
           RY+   G      K S  R Y++R     +E       E KR  R+              
Sbjct: 21  RYRYDYGYPHHHDKISKHRYYSIRVVDSGNEMVLSNLEEEKRKLRVLVAGGGIGGLVLAL 80

Query: 70  XXKHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDR 129
             KH+G++VKVFEKDLSAVRGEG+HRGPI            ID+ VA QIMEAGCVT +R
Sbjct: 81  AAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALAVLETIDQSVARQIMEAGCVTANR 140

Query: 130 INGLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDF 189
            NGLADG+SG+WF+ FDL TPA ++ LP+T VICRMALQDIL+N VG +I+ NKSKVVDF
Sbjct: 141 TNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMALQDILVNKVGSNIIRNKSKVVDF 200

Query: 190 IEDSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           I++ +KV VILE+G +++GD+L+GADGIWS+VR
Sbjct: 201 IQEPNKVRVILENGEQHDGDILIGADGIWSEVR 233


>Glyma09g00260.3 
          Length = 472

 Score =  214 bits (544), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 112/213 (52%), Positives = 142/213 (66%), Gaps = 3/213 (1%)

Query: 13  RYKNCNGILDFRSKTSNPRKYTVRC--DYDEDFCKERYENKR-FRMXXXXXXXXXXXXXX 69
           RY+   G      K S  R Y++R     +E       E KR  R+              
Sbjct: 21  RYRYDYGYPHHHDKISKHRYYSIRVVDSGNEMVLSNLEEEKRKLRVLVAGGGIGGLVLAL 80

Query: 70  XXKHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDR 129
             KH+G++VKVFEKDLSAVRGEG+HRGPI            ID+ VA QIMEAGCVT +R
Sbjct: 81  AAKHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSGALAVLETIDQSVARQIMEAGCVTANR 140

Query: 130 INGLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDF 189
            NGLADG+SG+WF+ FDL TPA ++ LP+T VICRMALQDIL+N VG +I+ NKSKVVDF
Sbjct: 141 TNGLADGLSGDWFSVFDLFTPASRKRLPLTLVICRMALQDILVNKVGSNIIRNKSKVVDF 200

Query: 190 IEDSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           I++ +KV VILE+G +++GD+L+GADGIWS+VR
Sbjct: 201 IQEPNKVRVILENGEQHDGDILIGADGIWSEVR 233


>Glyma17g20020.1 
          Length = 669

 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/151 (62%), Positives = 117/151 (77%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGF+V VFEKDLSA+RGEG++RGPI            ID +VA+++M  GC+TGDRIN
Sbjct: 106 KRKGFEVMVFEKDLSAIRGEGQYRGPIQIQSNALAALEAIDSEVADEVMRVGCITGDRIN 165

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DGVSG W+ +FD  TPA++R LPVTRVI RM LQ+IL  AVG DI+ N S VV+F++
Sbjct: 166 GLVDGVSGSWYVKFDTFTPAVERGLPVTRVISRMVLQEILARAVGEDIIMNASNVVNFVD 225

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           D +KVTV LE+G++Y GDVLVGADGIWSKVR
Sbjct: 226 DGNKVTVELENGQKYEGDVLVGADGIWSKVR 256


>Glyma11g05960.1 
          Length = 654

 Score =  198 bits (503), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 92/151 (60%), Positives = 117/151 (77%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGF+V VFEKD+SA+RGEG++RGPI            ID +VAE+++  GC+TGDRIN
Sbjct: 91  KRKGFEVVVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLEVAEEVLRVGCITGDRIN 150

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DG+SG W+ +FD  TPA +R LPVTRVI RMALQ+IL +AVG D++ N S VVDF++
Sbjct: 151 GLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMALQEILAHAVGEDVIMNDSNVVDFVD 210

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
              KVTV LE+G++Y+GD+LVGADGIWSKVR
Sbjct: 211 HGDKVTVELENGQKYDGDLLVGADGIWSKVR 241


>Glyma12g36920.1 
          Length = 206

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/169 (57%), Positives = 121/169 (71%), Gaps = 18/169 (10%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           KH+G++VKVFEKDLSAVRGEG+HRGPI            ID++VA QIMEAG VTG+R N
Sbjct: 25  KHRGYEVKVFEKDLSAVRGEGRHRGPIQLLSIALAVLEAIDQRVARQIMEAGRVTGNRTN 84

Query: 132 GLAD------------------GVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLN 173
           GLAD                   + G  F+ FDL TPA ++ LP+T VICRMALQDIL+N
Sbjct: 85  GLADVFCEVLDFIAIFCILRISNMEGAGFSVFDLFTPASRKRLPLTLVICRMALQDILVN 144

Query: 174 AVGLDIVSNKSKVVDFIEDSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
           AVG +I+ NKSKVVDFI++ SK+ VILE+G  ++GD+L+GADGIWS+VR
Sbjct: 145 AVGSNILRNKSKVVDFIQEPSKIRVILENGEHHDGDILIGADGIWSEVR 193


>Glyma01g39310.1 
          Length = 564

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/151 (54%), Positives = 101/151 (66%), Gaps = 13/151 (8%)

Query: 72  KHKGFDVKVFEKDLSAVRGEGKHRGPIXXXXXXXXXXXXIDKQVAEQIMEAGCVTGDRIN 131
           K KGF+V             G++RGPI            ID +VAE++M AGC+T DRIN
Sbjct: 107 KRKGFEV-------------GQYRGPIQIQSNASADLEAIDLEVAEEVMRAGCITDDRIN 153

Query: 132 GLADGVSGEWFTQFDLSTPALQRALPVTRVICRMALQDILLNAVGLDIVSNKSKVVDFIE 191
           GL DG+SG W+ +FD  TPA +R LPVTRVI RM LQDIL  AVG D + N S VVDF++
Sbjct: 154 GLVDGISGSWYIKFDTFTPAAERGLPVTRVISRMTLQDILARAVGEDAIMNDSNVVDFVD 213

Query: 192 DSSKVTVILEDGRRYNGDVLVGADGIWSKVR 222
              KVTV LE+ ++Y+GD+LVGADGIWSKVR
Sbjct: 214 HGGKVTVELENVQKYDGDLLVGADGIWSKVR 244