Jatropha Genome Database

JcCB0402451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0402451.20 - phase: 0 /partial/short
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g34080.1                                                        96   1e-20
Glyma06g20400.1                                                        91   3e-19
Glyma02g02250.1                                                        85   2e-17
Glyma01g05310.1                                                        84   5e-17
Glyma08g41000.1                                                        82   9e-17
Glyma18g15920.1                                                        80   4e-16
Glyma19g02510.1                                                        77   5e-15
Glyma13g05280.1                                                        77   5e-15
Glyma18g49320.1                                                        75   2e-14
Glyma09g37370.1                                                        74   5e-14

>Glyma04g34080.1 
          Length = 92

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/49 (95%), Positives = 49/49 (100%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 49
          VSA+KVLQETCNYIR+LHREVDDLSERLSELLATTDTAQAAIIRNLLMQ
Sbjct: 44 VSASKVLQETCNYIRSLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 92


>Glyma06g20400.1 
          Length = 92

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 49
          VSA+KVLQETCNYIR+LHREV DLSERLSELL TTDTAQAAIIRNLLMQ
Sbjct: 44 VSASKVLQETCNYIRSLHREVGDLSERLSELLDTTDTAQAAIIRNLLMQ 92


>Glyma02g02250.1 
          Length = 93

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/50 (86%), Positives = 47/50 (94%), Gaps = 2/50 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 48
          VSAAKVLQETCNYI+NLHREVDDLS+RLSELLA TD  +AQAAIIR+LLM
Sbjct: 44 VSAAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM 93


>Glyma01g05310.1 
          Length = 93

 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/50 (84%), Positives = 47/50 (94%), Gaps = 2/50 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 48
          VS+AKVLQETCNYI+NLHREVDDLS+RLSELLA TD  +AQAAIIR+LLM
Sbjct: 44 VSSAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM 93


>Glyma08g41000.1 
          Length = 93

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 48/50 (96%), Gaps = 2/50 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 48
          VSA+KVLQETCNYI++LHREVDDLS+RLS+LLATTD  +AQAAIIR+LLM
Sbjct: 44 VSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM 93


>Glyma18g15920.1 
          Length = 93

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 48/50 (96%), Gaps = 2/50 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 48
          VSA+KVLQETCNYI++LHREVDDLS+RLS+LLATTD  +AQAAIIR+LL+
Sbjct: 44 VSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL 93


>Glyma19g02510.1 
          Length = 91

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 45/49 (91%), Gaps = 2/49 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 47
          VSA+KVLQETCNYIR+LHREVDDLSERLS+LLAT   D+ +AAIIR+L+
Sbjct: 42 VSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma13g05280.1 
          Length = 91

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 45/49 (91%), Gaps = 2/49 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 47
          VSA+KVLQETCNYIR+LHREVDDLSERLS+LLAT   D+ +AAIIR+L+
Sbjct: 42 VSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma18g49320.1 
          Length = 92

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 2/51 (3%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLLMQ 49
          VSA+KVLQETCNYIR LHREV DLSERLS+LL T   D+A+A IIR+LL Q
Sbjct: 42 VSASKVLQETCNYIRGLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ 92


>Glyma09g37370.1 
          Length = 91

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 43/49 (87%), Gaps = 2/49 (4%)

Query: 1  VSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 47
          VSA+KVLQETCNYIR+LHREV DLSERLS+LL T   D+A+A IIR+LL
Sbjct: 42 VSASKVLQETCNYIRSLHREVSDLSERLSQLLTTIDADSAEAGIIRSLL 90