Jatropha Genome Database

JcCB0400811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0400811.10 - phase: 0 
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22760.1                                                       342   1e-94
Glyma16g13610.1                                                       304   7e-83
Glyma16g13610.2                                                       259   2e-69
Glyma01g40950.1                                                       254   7e-68
Glyma07g10810.1                                                       129   3e-30
Glyma07g10810.2                                                       129   3e-30
Glyma01g35060.1                                                        79   3e-15

>Glyma20g22760.1 
          Length = 561

 Score =  342 bits (878), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/232 (72%), Positives = 197/232 (84%), Gaps = 1/232 (0%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ Q+  +L S++ F  P+GV+LSYGTAGFRADAS+LQSTV+RVGILAALRSLKT+SVI
Sbjct: 1   MNEEQQCLLLSSASRFWPPKGVKLSYGTAGFRADASLLQSTVYRVGILAALRSLKTRSVI 60

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           GLMITASHNKVSDNGVK+ADPSGGML Q WEPFADA+ANA +P +L+ LI+EFV+KE I 
Sbjct: 61  GLMITASHNKVSDNGVKIADPSGGMLSQHWEPFADALANAPSPQHLLLLINEFVEKEGIS 120

Query: 121 FDGARSAEVLLGRDTRPSGLFLIEAAKQGVNSIVGALALDMGILTTPQLHWMVRARNKGM 180
            DG    EVLLGRDTRPSG  L++AAKQGV SIVGA+A DMGILTTPQLHWMVRARNKGM
Sbjct: 121 VDGDWHVEVLLGRDTRPSGDALLQAAKQGVTSIVGAVATDMGILTTPQLHWMVRARNKGM 180

Query: 181 KATEDDYYEQLSSSFRCLTDLIP-NGHKINEVDDRLVVDGANGVGAEKIQVL 231
           KA+E DY+EQLSSSFRCL DLIP    K + V+D++VVD ANGVG  K++ L
Sbjct: 181 KASEQDYFEQLSSSFRCLVDLIPAEKCKFDGVNDKVVVDAANGVGGVKLKYL 232


>Glyma16g13610.1 
          Length = 2095

 Score =  304 bits (778), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 155/224 (69%), Positives = 182/224 (81%), Gaps = 4/224 (1%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ Q+  +L S+++F  P+GV+LSYGT GFRADAS+LQSTV+RVGILAALRSLKT+SVI
Sbjct: 1   MNEEQQCLLLSSASHFWPPKGVKLSYGTGGFRADASLLQSTVYRVGILAALRSLKTRSVI 60

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           GLMITASHNKVSDNGVK+A  SGGML Q WEPF DA+ANA +P +L+ LI+EFV+KE I 
Sbjct: 61  GLMITASHNKVSDNGVKIAYASGGMLSQHWEPFVDALANAPSPQHLLLLINEFVEKEGIS 120

Query: 121 FDGARSAEVLLGRDTRPSGLFLIEAAKQGVNSIVGALALDMGILTTPQLHWMVRARNKGM 180
            DG    EVLLGRDTRPSG  L    KQ +N    A+A DMGILTTPQLHWMVRARNKGM
Sbjct: 121 VDGDWQVEVLLGRDTRPSGEML--CFKQ-LNRHEQAVATDMGILTTPQLHWMVRARNKGM 177

Query: 181 KATEDDYYEQLSSSFRCLTDLIP-NGHKINEVDDRLVVDGANGV 223
           KA+E DY+EQLSSSFRCL DLIP    K + V+D++VVDG+NGV
Sbjct: 178 KASEQDYFEQLSSSFRCLVDLIPAEKCKFDGVNDKVVVDGSNGV 221


>Glyma16g13610.2 
          Length = 596

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 135/224 (60%), Positives = 159/224 (70%), Gaps = 41/224 (18%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ Q+  +L S+++F  P+GV+LSYGT GFRADAS+LQSTV+RVGILAALRSLKT+SVI
Sbjct: 135 MNEEQQCLLLSSASHFWPPKGVKLSYGTGGFRADASLLQSTVYRVGILAALRSLKTRSVI 194

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           GLMITASHNKVSDNGVK+A  SGGML Q WEPF DA+ANA +P +L+             
Sbjct: 195 GLMITASHNKVSDNGVKIAYASGGMLSQHWEPFVDALANAPSPQHLL------------- 241

Query: 121 FDGARSAEVLLGRDTRPSGLFLIEAAKQGVNSIVGALALDMGILTTPQLHWMVRARNKGM 180
                                       GV SIVGA+A DMGILTTPQLHWMVRARNKGM
Sbjct: 242 ---------------------------LGVTSIVGAVATDMGILTTPQLHWMVRARNKGM 274

Query: 181 KATEDDYYEQLSSSFRCLTDLIP-NGHKINEVDDRLVVDGANGV 223
           KA+E DY+EQLSSSFRCL DLIP    K + V+D++VVDG+NGV
Sbjct: 275 KASEQDYFEQLSSSFRCLVDLIPAEKCKFDGVNDKVVVDGSNGV 318



 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/138 (61%), Positives = 105/138 (76%), Gaps = 10/138 (7%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ Q+  +L S++ F  P+GV+LSY TAGFRADAS+LQSTV          SLKT+ VI
Sbjct: 1   MNEEQQCLLLSSASRFWPPKGVKLSYDTAGFRADASLLQSTV----------SLKTRFVI 50

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           GLMIT+SHNKVSDNGVK+ DPSGGML Q WEPFA+A+ANA++P +++ LI+EFV KE I 
Sbjct: 51  GLMITSSHNKVSDNGVKIVDPSGGMLSQQWEPFANALANASSPQHILLLINEFVDKEGIS 110

Query: 121 FDGARSAEVLLGRDTRPS 138
            DG    EVLLGRD RP+
Sbjct: 111 VDGDWQVEVLLGRDMRPT 128


>Glyma01g40950.1 
          Length = 566

 Score =  254 bits (648), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 140/245 (57%), Positives = 164/245 (66%), Gaps = 50/245 (20%)

Query: 1   MNDRQKSFILYSSTNFPLPQGVRLSYGTAGFRADASILQSTVFRVGILAALRSLKTQSVI 60
           MN+ Q+  +L S++ F  P+GV+LSYGTAGFRADAS+LQSTV+RVGILAALRSLKT+SVI
Sbjct: 1   MNEEQQCLLLSSASRFSPPKGVKLSYGTAGFRADASLLQSTVYRVGILAALRSLKTRSVI 60

Query: 61  GLMITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQLIDEFVKKENIL 120
           GLMITASHNKVSDN VK+AD SGGML + WEPFADA+ANA +P +L+      VK+ ++ 
Sbjct: 61  GLMITASHNKVSDNRVKIADSSGGMLSRHWEPFADALANAPSPQHLL-----LVKRRDLG 115

Query: 121 FDG--ARSAEVLLGRDTRP----------------------------------------S 138
             G  +RSA    GRDTRP                                         
Sbjct: 116 GWGLASRSA---FGRDTRPITVSWRSLTLRGQMRPMWSQLGCRQPDTPKIVTLWLKSLLQ 172

Query: 139 GLFLIEAAKQGVNSIVGALALDMGILTTPQLHWMVRARNKGMKATEDDYYEQLSSSFRCL 198
            LF      +GV SIVGA+A DMGILTTPQLHWMVRARNKGMKA+E DY+EQLSSSFRCL
Sbjct: 173 TLFYNLEGIRGVTSIVGAVATDMGILTTPQLHWMVRARNKGMKASEQDYFEQLSSSFRCL 232

Query: 199 TDLIP 203
            DLIP
Sbjct: 233 VDLIP 237


>Glyma07g10810.1 
          Length = 423

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 1/85 (1%)

Query: 148 QGVNSIVGALALDMGILTTPQLHWMVRARNKGMKATEDDYYEQLSSSFRCLTDLIP-NGH 206
           +GV SIVGA+A DMGILTTPQLHWMVRARNKGMKA+E DY+EQLSSSFRCL DLIP    
Sbjct: 12  KGVTSIVGAVATDMGILTTPQLHWMVRARNKGMKASEQDYFEQLSSSFRCLVDLIPAEKC 71

Query: 207 KINEVDDRLVVDGANGVGAEKIQVL 231
           K + V+D++VVDGANGVG  K++ L
Sbjct: 72  KFDGVNDKVVVDGANGVGGVKLKDL 96


>Glyma07g10810.2 
          Length = 414

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 1/85 (1%)

Query: 148 QGVNSIVGALALDMGILTTPQLHWMVRARNKGMKATEDDYYEQLSSSFRCLTDLIP-NGH 206
           +GV SIVGA+A DMGILTTPQLHWMVRARNKGMKA+E DY+EQLSSSFRCL DLIP    
Sbjct: 3   KGVTSIVGAVATDMGILTTPQLHWMVRARNKGMKASEQDYFEQLSSSFRCLVDLIPAEKC 62

Query: 207 KINEVDDRLVVDGANGVGAEKIQVL 231
           K + V+D++VVDGANGVG  K++ L
Sbjct: 63  KFDGVNDKVVVDGANGVGGVKLKDL 87


>Glyma01g35060.1 
          Length = 805

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 41/47 (87%)

Query: 63  MITASHNKVSDNGVKVADPSGGMLIQDWEPFADAIANAATPINLVQL 109
           MITASHNKVSDNG+K+ADPSGGML + WEPFADA+ANA +P  L+ L
Sbjct: 1   MITASHNKVSDNGIKIADPSGGMLSRHWEPFADALANAPSPQRLLLL 47