Jatropha Genome Database

JcCB0399111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0399111.10 + phase: 0 
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g02510.1                                                       152   7e-38
Glyma13g05280.1                                                       152   7e-38
Glyma18g49320.1                                                       148   1e-36
Glyma09g37370.1                                                       148   1e-36
Glyma08g41000.1                                                       124   3e-29
Glyma02g02250.1                                                       122   6e-29
Glyma01g05310.1                                                       121   2e-28
Glyma04g34080.1                                                       118   1e-27
Glyma18g15920.1                                                       115   9e-27
Glyma06g20400.1                                                       115   1e-26
Glyma04g33920.1                                                        52   2e-07
Glyma06g20520.1                                                        52   2e-07

>Glyma19g02510.1 
          Length = 91

 Score =  152 bits (385), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/90 (86%), Positives = 85/90 (94%)

Query: 1  MSSRRPRQSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHR 60
          MSSRR RQ ++  RISD+QII+L+SKLRQL+PEIRDRRSDKVSASKVLQETCNYIR+LHR
Sbjct: 1  MSSRRSRQQSASTRISDDQIIDLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSQLLTTIDADSPEAAIIRSLI 90
          EVDDLSERLSQLL TIDADSPEAAIIRSLI
Sbjct: 61 EVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma13g05280.1 
          Length = 91

 Score =  152 bits (385), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/90 (86%), Positives = 85/90 (94%)

Query: 1  MSSRRPRQSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHR 60
          MSSRR RQ ++  RISD+QII+L+SKLRQL+PEIRDRRSDKVSASKVLQETCNYIR+LHR
Sbjct: 1  MSSRRSRQQSASTRISDDQIIDLVSKLRQLVPEIRDRRSDKVSASKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSQLLTTIDADSPEAAIIRSLI 90
          EVDDLSERLSQLL TIDADSPEAAIIRSLI
Sbjct: 61 EVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma18g49320.1 
          Length = 92

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/90 (83%), Positives = 81/90 (90%)

Query: 1  MSSRRPRQSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHR 60
          MSSRR RQ +   RISD+QIIEL+SKLRQL+PEIR+RRSDKVSASKVLQETCNYIR LHR
Sbjct: 1  MSSRRSRQHSGSTRISDDQIIELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRGLHR 60

Query: 61 EVDDLSERLSQLLTTIDADSPEAAIIRSLI 90
          EV DLSERLSQLLTTIDADS EA IIRSL+
Sbjct: 61 EVSDLSERLSQLLTTIDADSAEAGIIRSLL 90


>Glyma09g37370.1 
          Length = 91

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/90 (83%), Positives = 82/90 (91%)

Query: 1  MSSRRPRQSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHR 60
          MSSRR RQ +   RISD+QIIEL+SKLRQL+PEIR+RRSDKVSASKVLQETCNYIR+LHR
Sbjct: 1  MSSRRSRQHSGSTRISDDQIIELVSKLRQLVPEIRNRRSDKVSASKVLQETCNYIRSLHR 60

Query: 61 EVDDLSERLSQLLTTIDADSPEAAIIRSLI 90
          EV DLSERLSQLLTTIDADS EA IIRSL+
Sbjct: 61 EVSDLSERLSQLLTTIDADSAEAGIIRSLL 90


>Glyma08g41000.1 
          Length = 93

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 73/84 (86%)

Query: 8  QSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSE 67
          QS     I+D QI +LISKL+QL+PE+R RRSDKVSASKVLQETCNYI++LHREVDDLS+
Sbjct: 10 QSGVSTEITDAQITDLISKLQQLIPELRARRSDKVSASKVLQETCNYIKSLHREVDDLSD 69

Query: 68 RLSQLLTTIDADSPEAAIIRSLIM 91
          RLSQLL T D++S +AAIIRSL+M
Sbjct: 70 RLSQLLATTDSNSAQAAIIRSLLM 93


>Glyma02g02250.1 
          Length = 93

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 73/84 (86%)

Query: 8  QSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSE 67
          QS +   I+D QI +L+SKL+QL+PE+R RRSDKVSA+KVLQETCNYI+NLHREVDDLS+
Sbjct: 10 QSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSD 69

Query: 68 RLSQLLTTIDADSPEAAIIRSLIM 91
          RLS+LL   D++S +AAIIRSL+M
Sbjct: 70 RLSELLANTDSNSAQAAIIRSLLM 93


>Glyma01g05310.1 
          Length = 93

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 73/84 (86%)

Query: 8  QSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSE 67
          QS +   I+D QI +L+SKL+QL+PE+R RRSDKVS++KVLQETCNYI+NLHREVDDLS+
Sbjct: 10 QSGASAEITDAQITDLVSKLQQLIPELRARRSDKVSSAKVLQETCNYIKNLHREVDDLSD 69

Query: 68 RLSQLLTTIDADSPEAAIIRSLIM 91
          RLS+LL   D++S +AAIIRSL+M
Sbjct: 70 RLSELLANTDSNSAQAAIIRSLLM 93


>Glyma04g34080.1 
          Length = 92

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 71/77 (92%), Gaps = 2/77 (2%)

Query: 15 ISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLT 74
          I+D+QI +L+SKL+QLLPEIRDRRSDKVSASKVLQETCNYIR+LHREVDDLSERLS+LL 
Sbjct: 17 ITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVDDLSERLSELLA 76

Query: 75 TIDADSPEAAIIRSLIM 91
          T   D+ +AAIIR+L+M
Sbjct: 77 T--TDTAQAAIIRNLLM 91


>Glyma18g15920.1 
          Length = 93

 Score =  115 bits (289), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 70/77 (90%)

Query: 15 ISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLT 74
          I+D QI ++ISKL+QL+PE+  RRSDKVSASKVLQETCNYI++LHREVDDLS+RLSQLL 
Sbjct: 17 ITDAQITDIISKLQQLIPELDARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLA 76

Query: 75 TIDADSPEAAIIRSLIM 91
          T D++S +AAIIRSL++
Sbjct: 77 TTDSNSAQAAIIRSLLL 93


>Glyma06g20400.1 
          Length = 92

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 70/77 (90%), Gaps = 2/77 (2%)

Query: 15 ISDEQIIELISKLRQLLPEIRDRRSDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLT 74
          I+D+QI +L+SKL+QLLPEIRDRRSDKVSASKVLQETCNYIR+LHREV DLSERLS+LL 
Sbjct: 17 ITDDQINDLVSKLQQLLPEIRDRRSDKVSASKVLQETCNYIRSLHREVGDLSERLSELLD 76

Query: 75 TIDADSPEAAIIRSLIM 91
          T   D+ +AAIIR+L+M
Sbjct: 77 T--TDTAQAAIIRNLLM 91


>Glyma04g33920.1 
          Length = 92

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 6  PRQSAS-VPRISDEQIIELISKLRQLLPEIR---DRRSDKVSASKVLQETCNYIRNLHRE 61
          P Q  S   + ++ +I +L+ +L+ LLP++    + R+  VS  K+++ETC++I  L +E
Sbjct: 2  PGQRNSRTSKFTESEINDLMLRLQALLPQLNQTSNSRASSVSVMKIMKETCSHITRLQKE 61

Query: 62 VDDLSERLSQLLTTID 77
          V DL ERL QL+ ++D
Sbjct: 62 VKDLGERLVQLMDSVD 77


>Glyma06g20520.1 
          Length = 91

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 59/92 (64%), Gaps = 6/92 (6%)

Query: 1  MSSRRPRQSASVPRISDEQIIELISKLRQLLPEIRDRRSDKVSAS--KVLQETCNYIRNL 58
          MS +R  +++   + ++ +I +L+ +L+ LLP++   R+ + S S  K+++ETC++I  L
Sbjct: 1  MSGQRNFRTS---KFTESEINDLMLRLQALLPQLNQTRNSRASESLMKIMKETCSHINRL 57

Query: 59 HREVDDLSERLSQLLTTID-ADSPEAAIIRSL 89
            EV DL ERL++L+ ++D +D  E  + R L
Sbjct: 58 QNEVKDLGERLAELIDSVDLSDIDEECLTRLL 89