Jatropha Genome Database

JcCB0398651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0398651.10 + phase: 0 
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g37500.2                                                       213   6e-56
Glyma04g37500.1                                                       213   6e-56
Glyma08g01330.1                                                       122   1e-28
Glyma06g17570.1                                                       109   1e-24
Glyma15g15030.1                                                       107   5e-24
Glyma15g20660.1                                                       101   3e-22
Glyma17g33330.1                                                        49   2e-06
Glyma10g41750.1                                                        49   2e-06
Glyma05g28360.1                                                        49   3e-06
Glyma20g34640.1                                                        48   3e-06
Glyma10g13700.1                                                        47   7e-06
Glyma08g42830.1                                                        47   8e-06

>Glyma04g37500.2 
          Length = 186

 Score =  213 bits (542), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 94/108 (87%), Positives = 105/108 (97%)

Query: 41  EPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSAR 100
           EPNRIWGEKC+K+D+VINQGPTAPLPSGIPTYTVEIMN+CV+GCDISGIHL CGWFSSAR
Sbjct: 78  EPNRIWGEKCSKSDVVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSAR 137

Query: 101 LINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 148
           LINPK+FKRLRYNDCLVNDG+PL+NG T+SF+YANTF YPLSVSSV+C
Sbjct: 138 LINPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVVC 185


>Glyma04g37500.1 
          Length = 186

 Score =  213 bits (542), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 94/108 (87%), Positives = 105/108 (97%)

Query: 41  EPNRIWGEKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSAR 100
           EPNRIWGEKC+K+D+VINQGPTAPLPSGIPTYTVEIMN+CV+GCDISGIHL CGWFSSAR
Sbjct: 78  EPNRIWGEKCSKSDVVINQGPTAPLPSGIPTYTVEIMNMCVSGCDISGIHLRCGWFSSAR 137

Query: 101 LINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 148
           LINPK+FKRLRYNDCLVNDG+PL+NG T+SF+YANTF YPLSVSSV+C
Sbjct: 138 LINPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVVC 185


>Glyma08g01330.1 
          Length = 81

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 64/78 (82%)

Query: 48  EKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIF 107
           EKC+K+ I INQ PT  LPSGIPTYTVEI N CV+GC+IS IH+ CG FSS+RLINPKIF
Sbjct: 3   EKCSKSVIQINQSPTERLPSGIPTYTVEIANTCVSGCNISEIHVACGMFSSSRLINPKIF 62

Query: 108 KRLRYNDCLVNDGKPLVN 125
           KRL YNDCLVNDGK   N
Sbjct: 63  KRLLYNDCLVNDGKRFRN 80


>Glyma06g17570.1 
          Length = 59

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 55/58 (94%)

Query: 91  LTCGWFSSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSVIC 148
           + CGWFSSARLINPK+FKRLRYNDCLVNDG+PL+NG T+SF+YANTF YPLSVSSV+C
Sbjct: 1   MGCGWFSSARLINPKLFKRLRYNDCLVNDGRPLINGATISFQYANTFLYPLSVSSVVC 58


>Glyma15g15030.1 
          Length = 168

 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 3/110 (2%)

Query: 38  AMEEPNRIWGE-KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWF 96
           A     + W    CT  DI I+Q  T+    GIP + V+I+N CV+GC  S IHL CG F
Sbjct: 58  AHSASRKFWLHGTCTSKDISISQSQTST--PGIPQFIVQIVNNCVSGCAPSDIHLHCGMF 115

Query: 97  SSARLINPKIFKRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           +SAR++NP++FKR+ Y+DCLVN G PL     + F Y+NTF YPL+  S 
Sbjct: 116 ASARMVNPRLFKRISYDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSA 165


>Glyma15g20660.1 
          Length = 99

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 2/97 (2%)

Query: 50  CTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFKR 109
           CT  DI I+Q  T+    GIP + V+I+N CV+GC  S IH  CG F+SAR++NP++FKR
Sbjct: 2   CTSKDISISQSQTST--PGIPQFIVQIVNNCVSGCAPSDIHFHCGMFASARMVNPRLFKR 59

Query: 110 LRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLSVSSV 146
           +  +DCLVN G PL     + F Y+NTF YPL+  S 
Sbjct: 60  ISCDDCLVNGGNPLAPSQIIRFTYSNTFSYPLAFKSA 96


>Glyma17g33330.1 
          Length = 122

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 49  KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFK 108
           +C  +D+ ++Q  T     G P + V I N C   C    + L+C  F S   I+P + K
Sbjct: 24  QCFLSDLSVSQIQTGVKMQGKPEWNVTITNNC--SCVQKNVILSCNGFQSVEQIDPSLLK 81

Query: 109 RLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLS--VSSVICS 149
            +  N CLVNDG+P+     + F+Y     +PL+   S + CS
Sbjct: 82  -ISPNGCLVNDGQPIYTDA-IKFKYVWNQSFPLNPISSEIACS 122


>Glyma10g41750.1 
          Length = 121

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 48  EKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIF 107
            +C+  DI I+Q  T     G   ++V I N C   C  S + L C  F S   I+P+ F
Sbjct: 23  SQCSLHDIHISQKQTGATIHGKKEWSVTIANWC--SCYQSNVMLNCKGFQSVEPIDPQ-F 79

Query: 108 KRLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPL 141
            ++  N CLV++G+PL  G T+ F YA    +P 
Sbjct: 80  LKISGNVCLVSNGQPLFRGVTV-FNYAWDKPFPF 112


>Glyma05g28360.1 
          Length = 122

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 49  KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFK 108
           +C+  D+ +NQ PT     G   ++V I N C   C    + L C  F S   I P + K
Sbjct: 24  QCSLKDLTVNQFPTRNKVQGKQEWSVTINNKC--PCVQKNVILNCKGFQSVESIKPSLLK 81

Query: 109 RLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLS 142
            L +N CLVN G+ +  G  + F YA+   +PL+
Sbjct: 82  VL-HNICLVNSGQAIY-GIPIKFRYASDQPFPLN 113


>Glyma20g34640.1 
          Length = 104

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 49  KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFK 108
           +CT +++ ++Q  T     G   + V I+N C   CD S + L C  F + + I+P I  
Sbjct: 3   QCTLSNLEVHQYDTGRPYQGTSLFAVTIINRCTPLCDQSNVKLNCTGFKTVKPIDPSIL- 61

Query: 109 RLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLS 142
            +  + C+V +G+P+     ++F YA  + + L+
Sbjct: 62  NVSGDVCIVKNGQPITIDDPVNFHYAYDYSFNLN 95


>Glyma10g13700.1 
          Length = 124

 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 48  EKCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIF 107
           + C+  +I I    T     G P + V ++N C   C+ S I L+C  F SA  ++P I 
Sbjct: 23  DDCSLNNINIGTSRTGREIQGQPEWNVTVINNC--NCEQSQIKLSCKGFQSAESVDPSIL 80

Query: 108 KRLRYNDCLVNDGKPLVNGGTLSFEYA 134
             +  + CL+ +G P+    T++F YA
Sbjct: 81  S-MEGDSCLLINGNPMKGSDTVNFSYA 106


>Glyma08g42830.1 
          Length = 103

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 49  KCTKADIVINQGPTAPLPSGIPTYTVEIMNVCVTGCDISGIHLTCGWFSSARLINPKIFK 108
           +C+  D+ + Q  +  + +G+P + V + N C   C  + + L C  F S   I+P++ K
Sbjct: 3   QCSLKDLHVGQFLSGNIVNGMPEWNVLVSNWC--RCVQTNVMLNCTGFESIEPIDPRLLK 60

Query: 109 -RLRYNDCLVNDGKPLVNGGTLSFEYANTFHYPLS-VSSVI 147
            +     CLVN GKP +      F+YA    +P S +SSVI
Sbjct: 61  FQPLQGVCLVNSGKP-IGKDVFEFQYAWDVPFPFSPISSVI 100