Jatropha Genome Database

JcCB0397941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0397941.10 - phase: 0 
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g24540.1                                                        57   4e-09
Glyma13g35230.1                                                        52   1e-07
Glyma05g08270.1                                                        52   2e-07
Glyma17g12700.1                                                        52   2e-07
Glyma17g36790.1                                                        50   4e-07
Glyma13g07580.1                                                        50   6e-07
Glyma18g53450.1                                                        49   1e-06
Glyma08g25950.1                                                        48   2e-06
Glyma08g25950.2                                                        48   2e-06
Glyma09g20270.1                                                        48   3e-06
Glyma08g48030.1                                                        48   3e-06
Glyma09g20270.2                                                        47   5e-06
Glyma13g33690.1                                                        47   6e-06

>Glyma06g24540.1 
          Length = 526

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 7  IFMVALTVLVVSKIWRLVKISIW-KPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDA 65
          +F+  +T+L+V K    V IS+W +P  +   F  QG+ GPPY  F G++ +   + M A
Sbjct: 9  LFVFLMTLLLVLK----VTISLWWRPRKIEGHFSNQGIRGPPYRFFIGNVKELVGMMMKA 64

Query: 66 TQTVLDTNSNDITPRVLPHYHKWCQQYG 93
          ++  +   S++I PRVL  YH W + YG
Sbjct: 65 SEKPMPF-SHNILPRVLSFYHHWKKIYG 91


>Glyma13g35230.1 
          Length = 523

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 7  IFMVALTVLVVSKIWRLVKISIWKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDAT 66
          I  V + + + S  WR++     +P  L R  R QG+ G PY +  G L +  +L+M+A 
Sbjct: 12 IVFVIVILALTSWAWRMLNWLWIRPKRLERLLREQGLQGNPYRILVGDLKEIVKLQMEAR 71

Query: 67 QTVLDTNSNDITPRVLPHYHKWCQQYGE 94
             ++  S+DI PRV  H H+   ++G+
Sbjct: 72 SKPMNL-SHDIVPRVFAHLHQSVLKHGK 98


>Glyma05g08270.1 
          Length = 519

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 29 WKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPRVLPHYHKW 88
          W+P  +   F +QG+ GPPY  F G++ +   + + A+   +   S++I PRVL  YH W
Sbjct: 30 WRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPF-SHNILPRVLSFYHHW 88

Query: 89 CQQYG 93
           + YG
Sbjct: 89 KKIYG 93


>Glyma17g12700.1 
          Length = 517

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 29 WKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPRVLPHYHKW 88
          W+P  +   F +QG+ GPPY  F G++ +   + + A+   +   S++I PRVL  YH W
Sbjct: 30 WRPRKIEAHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPF-SHNILPRVLSFYHHW 88

Query: 89 CQQYG 93
           + YG
Sbjct: 89 KKIYG 93


>Glyma17g36790.1 
          Length = 503

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 28 IWKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPRVLPHYHK 87
          IW P+ + R FR QG+ GP Y    G+ ++ + +  +     +    +DI  RV P YHK
Sbjct: 25 IWVPWVIARHFREQGIRGPSYRPIKGNTDEIRGMYAEVQSRPMAL-CHDILERVCPFYHK 83

Query: 88 WCQQYGE 94
          W + YG+
Sbjct: 84 WSRMYGK 90


>Glyma13g07580.1 
          Length = 512

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 9  MVALTVLVVSKIWRLVKISI------W-KPYALTRSFRRQGVSGPPYYLFSGSLNDWKRL 61
          MV LT L+V  +  L+K++       W  P  + +   RQGV GP      G++ D   L
Sbjct: 3  MVILTTLLVIFVTVLLKVAYDTISCYWLTPMRIRKIMERQGVHGPKPRFLIGNIIDMTSL 62

Query: 62 KMDATQTVLDTNSNDITPRVLPHYHKWCQQYGE 94
             A    + T ++DI  R+LPH+  W  QYG+
Sbjct: 63 VSRAVSQDMKTINHDIVGRLLPHFVAWSNQYGK 95


>Glyma18g53450.1 
          Length = 519

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%)

Query: 31 PYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPRVLPHYHKWCQ 90
          P  + ++   QGV GP    F+G++ D   L   AT   + T S+DI  R+LPH+  W  
Sbjct: 32 PLRIKKTMDMQGVRGPKPRFFTGNILDMASLVSKATSQDMKTISHDIVGRLLPHFLLWSS 91

Query: 91 QYGE 94
          Q+G+
Sbjct: 92 QFGK 95


>Glyma08g25950.1 
          Length = 533

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 12  LTVLVVSKIWRLVKISIW---KPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQT 68
           +TV+    IW       W   +P  + R  + QG+ G  Y    G + D  ++  +A   
Sbjct: 27  ITVIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSK 86

Query: 69  VLDTNSNDITPRVLPHYHKWCQQYGE 94
            +D +SNDI PRVLP+      +YG+
Sbjct: 87  PMDPHSNDIAPRVLPYVVHTIAKYGK 112


>Glyma08g25950.2 
          Length = 398

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 12  LTVLVVSKIWRLVKISIW---KPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQT 68
           +TV+    IW       W   +P  + R  + QG+ G  Y    G + D  ++  +A   
Sbjct: 27  ITVIATVLIWWFWNALNWVWLRPKRIERRLKEQGIQGNSYRPLIGDIRDMVKMIKEAKSK 86

Query: 69  VLDTNSNDITPRVLPHYHKWCQQYGE 94
            +D +SNDI PRVLP+      +YG+
Sbjct: 87  PMDPHSNDIAPRVLPYVVHTIAKYGK 112


>Glyma09g20270.1 
          Length = 508

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 27 SIWKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNS---NDITPRVLP 83
          + W P+   R F+RQG+ GP Y    G+ ++ +RL  +A      +     +DI  RV P
Sbjct: 22 NFWVPWRTERHFKRQGIGGPGYRPIFGNTSEIRRLYAEAKSEASASPPPFHHDIMGRVAP 81

Query: 84 HYHKWCQQYGE 94
           Y +W + YG+
Sbjct: 82 FYDRWSRAYGK 92


>Glyma08g48030.1 
          Length = 520

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 31 PYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPRVLPHYHKWCQ 90
          P  + +    QGV GP    F+G++ D   L   AT   + T S+DI  R+LPH+  W  
Sbjct: 33 PLRIKKMMDMQGVRGPKPCFFTGNILDMASLVSKATSQDMKTISHDIVGRLLPHFLLWSG 92

Query: 91 QYGE 94
          Q+G+
Sbjct: 93 QFGK 96


>Glyma09g20270.2 
          Length = 253

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 27 SIWKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTN---SNDITPRVLP 83
          + W P+   R F+RQG+ GP Y    G+ ++ +RL  +A      +     +DI  RV P
Sbjct: 22 NFWVPWRTERHFKRQGIGGPGYRPIFGNTSEIRRLYAEAKSEASASPPPFHHDIMGRVAP 81

Query: 84 HYHKWCQQYGE 94
           Y +W + YG+
Sbjct: 82 FYDRWSRAYGK 92


>Glyma13g33690.1 
          Length = 537

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 39/74 (52%)

Query: 21  WRLVKISIWKPYALTRSFRRQGVSGPPYYLFSGSLNDWKRLKMDATQTVLDTNSNDITPR 80
           W+++     +P  L R  R QG+ G  Y LF G L ++ +++ +A    ++  S+DI PR
Sbjct: 40  WKMLNWLWLRPKRLERLLREQGLQGNSYTLFVGDLKEFGKMRNEALSKPMNLFSHDIAPR 99

Query: 81  VLPHYHKWCQQYGE 94
           VL        ++G+
Sbjct: 100 VLSFIQHTVNKHGK 113