Jatropha Genome Database

JcCB0397691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0397691.10 - phase: 1 /partial
         (232 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g01950.1                                                       421   e-118
Glyma19g37750.2                                                       290   6e-79
Glyma19g37750.1                                                       290   8e-79
Glyma03g35020.2                                                       290   9e-79
Glyma03g35020.1                                                       290   9e-79
Glyma06g02050.1                                                       198   3e-51

>Glyma04g01950.1 
          Length = 737

 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 198/226 (87%), Positives = 214/226 (94%)

Query: 7   EFNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRL 66
           ++NEYFSEAT VDAVVYLMLAN LIH+ LPDATVIAEDVSGMPGLG  VS+GGIGFDYRL
Sbjct: 310 DYNEYFSEATDVDAVVYLMLANCLIHSILPDATVIAEDVSGMPGLGQPVSDGGIGFDYRL 369

Query: 67  AMAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLM 126
           AMAIPDKWIDYLKNK+D  WSM+EI+WSLTNRRYTEKCV+YAESHDQAIVGDKTVAFLLM
Sbjct: 370 AMAIPDKWIDYLKNKNDYAWSMKEISWSLTNRRYTEKCVSYAESHDQAIVGDKTVAFLLM 429

Query: 127 DKEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPREG 186
           D+EMYSGMS L DA PI+ERGIAL KM+HF+TMALGGEGYLNFMGNEFGHPEWIDFPREG
Sbjct: 430 DEEMYSGMSSLVDASPIVERGIALQKMIHFITMALGGEGYLNFMGNEFGHPEWIDFPREG 489

Query: 187 NGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLASTK 232
           NGWSY+KCRRQWNLVDT+HLRYKFMNAFDRAMN LD+K+SFLASTK
Sbjct: 490 NGWSYEKCRRQWNLVDTDHLRYKFMNAFDRAMNLLDDKFSFLASTK 535


>Glyma19g37750.2 
          Length = 868

 Score =  290 bits (743), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 143/234 (61%), Positives = 173/234 (73%), Gaps = 12/234 (5%)

Query: 8   FNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRLA 67
           +NEYF  AT VDAVVYLML N +IH   P+A  I EDVSGMP       +GGIGFDYRL 
Sbjct: 513 YNEYFGFATDVDAVVYLMLTNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGIGFDYRLH 572

Query: 68  MAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLMD 127
           MAI DKWI+ LK K+DE+W M +I  +LTNRR+ EKCVAYAESHDQA+VGDKT+AF LMD
Sbjct: 573 MAIADKWIEILK-KNDEDWKMGDIIHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMD 631

Query: 128 KEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPR--- 184
           K+MY  M+    + PII+RGIALHKM+  +TM LGGEGYLNFMGNEFGHPEWIDFPR   
Sbjct: 632 KDMYDFMALDRPSTPIIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQ 691

Query: 185 --------EGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAS 230
                    GN  S+DKCRR+++L D ++LRY+ M  FD+AM  L+EK+ F+ +
Sbjct: 692 HLPNGVVVPGNNNSFDKCRRRFDLGDADYLRYQGMQEFDQAMQHLEEKFGFMTA 745


>Glyma19g37750.1 
          Length = 870

 Score =  290 bits (742), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 143/234 (61%), Positives = 173/234 (73%), Gaps = 12/234 (5%)

Query: 8   FNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRLA 67
           +NEYF  AT VDAVVYLML N +IH   P+A  I EDVSGMP       +GGIGFDYRL 
Sbjct: 513 YNEYFGFATDVDAVVYLMLTNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGIGFDYRLH 572

Query: 68  MAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLMD 127
           MAI DKWI+ LK K+DE+W M +I  +LTNRR+ EKCVAYAESHDQA+VGDKT+AF LMD
Sbjct: 573 MAIADKWIEILK-KNDEDWKMGDIIHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMD 631

Query: 128 KEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPR--- 184
           K+MY  M+    + PII+RGIALHKM+  +TM LGGEGYLNFMGNEFGHPEWIDFPR   
Sbjct: 632 KDMYDFMALDRPSTPIIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQ 691

Query: 185 --------EGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAS 230
                    GN  S+DKCRR+++L D ++LRY+ M  FD+AM  L+EK+ F+ +
Sbjct: 692 HLPNGVVVPGNNNSFDKCRRRFDLGDADYLRYQGMQEFDQAMQHLEEKFGFMTA 745


>Glyma03g35020.2 
          Length = 821

 Score =  290 bits (742), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 141/234 (60%), Positives = 173/234 (73%), Gaps = 12/234 (5%)

Query: 8   FNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRLA 67
           +NEYF  AT VDAV+YLML N +IH   P+A  I EDVSGMP       +GG+GFDYRL 
Sbjct: 513 YNEYFGFATDVDAVIYLMLTNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLH 572

Query: 68  MAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLMD 127
           MAI DKWI+ LK K+DE+W M +I  +LTNRR+ EKCVAYAESHDQA+VGDKT+AF LMD
Sbjct: 573 MAIADKWIEILK-KNDEDWKMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMD 631

Query: 128 KEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPR--- 184
           K+MY  M+    + PII+RGIALHKM+  +TM LGGEGYLNFMGNEFGHPEWIDFPR   
Sbjct: 632 KDMYDFMALDRPSTPIIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQ 691

Query: 185 --------EGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAS 230
                    GN  S+DKCRR+++L D ++LRY+ M  FD+AM  L+EK+ F+ +
Sbjct: 692 HLPTGVIVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEEKFGFMTA 745


>Glyma03g35020.1 
          Length = 870

 Score =  290 bits (742), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 141/234 (60%), Positives = 173/234 (73%), Gaps = 12/234 (5%)

Query: 8   FNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRLA 67
           +NEYF  AT VDAV+YLML N +IH   P+A  I EDVSGMP       +GG+GFDYRL 
Sbjct: 513 YNEYFGFATDVDAVIYLMLTNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLH 572

Query: 68  MAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLMD 127
           MAI DKWI+ LK K+DE+W M +I  +LTNRR+ EKCVAYAESHDQA+VGDKT+AF LMD
Sbjct: 573 MAIADKWIEILK-KNDEDWKMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMD 631

Query: 128 KEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPR--- 184
           K+MY  M+    + PII+RGIALHKM+  +TM LGGEGYLNFMGNEFGHPEWIDFPR   
Sbjct: 632 KDMYDFMALDRPSTPIIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQ 691

Query: 185 --------EGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAS 230
                    GN  S+DKCRR+++L D ++LRY+ M  FD+AM  L+EK+ F+ +
Sbjct: 692 HLPTGVIVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEEKFGFMTA 745


>Glyma06g02050.1 
          Length = 630

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/181 (60%), Positives = 127/181 (70%), Gaps = 30/181 (16%)

Query: 7   EFNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRL 66
           ++NEYFSEAT  D V+Y+          LPDATVIAEDVSGMPGLG  VS+GGIGFDYRL
Sbjct: 277 DYNEYFSEAT--DVVLYI----------LPDATVIAEDVSGMPGLGQPVSDGGIGFDYRL 324

Query: 67  AMAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLM 126
           AMAIPDKWIDYLKNK+D  WSM+EI+WSLTNRRYTEKCV+YAESHDQ   G+     +  
Sbjct: 325 AMAIPDKWIDYLKNKNDYAWSMKEISWSLTNRRYTEKCVSYAESHDQKNDGNCREQII-- 382

Query: 127 DKEMYSGMSCLTDAPPI-------------IERGIALHKMVHFLTMALGGEGYLNFMGNE 173
            K +Y  +S   ++ PI              +  I L KM+HF+TMALGGEGYLNFMGNE
Sbjct: 383 -KNLY--ISLFFNSTPINVVQFLPWAGRCWRQDWIYLQKMIHFITMALGGEGYLNFMGNE 439

Query: 174 F 174
            
Sbjct: 440 L 440