Jatropha Genome Database

JcCB0392661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0392661.10 - phase: 0 /partial
         (55 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03820.1                                                        67   4e-12
Glyma02g41870.1                                                        55   2e-08
Glyma14g07100.1                                                        54   3e-08

>Glyma18g03820.1 
          Length = 475

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 42/53 (79%)

Query: 1  MAEVESGSPKRTATTPYEEAMDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          MA+ ++GS K ++ TPYEEA+DALSSLITKRTR    N  +RF++L+ YLK++
Sbjct: 1  MAQGDNGSSKSSSVTPYEEALDALSSLITKRTRVGDVNMEERFNVLYKYLKML 53


>Glyma02g41870.1 
          Length = 504

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 21 MDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          M+ALSSLIT+RTRAD SN GD+F LL+DYLK++
Sbjct: 1  MEALSSLITRRTRADDSNVGDQFSLLYDYLKML 33


>Glyma14g07100.1 
          Length = 383

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 21 MDALSSLITKRTRADKSNKGDRFDLLFDYLKVI 53
          M+ALSSLIT+RTRAD SN GD+F LL+DYLK++
Sbjct: 1  MEALSSLITRRTRADDSNVGDQFSLLYDYLKML 33