Jatropha Genome Database

JcCB0391751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0391751.10 - phase: 0 /partial
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23970.1                                                        62   1e-10
Glyma10g43010.1                                                        62   1e-10

>Glyma20g23970.1 
          Length = 215

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 1   CCGCNIFHKLVDNLNLFHEMKCYVNPSFNYRDAKW 35
           CCGCN +HKLVD+LNLF E  CY+N SFNY+   W
Sbjct: 161 CCGCNAYHKLVDHLNLFQETNCYLNSSFNYKGEGW 195


>Glyma10g43010.1 
          Length = 217

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 1   CCGCNIFHKLVDNLNLFHEMKCYVNPSFNYRDAKW 35
           CCGCN +HKLVD+LNLF E  CY+N SFNY+   W
Sbjct: 162 CCGCNAYHKLVDHLNLFQETNCYLNSSFNYKGEGW 196