Jatropha Genome Database

JcCB0389891.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0389891.20 - phase: 0 
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02380.1                                                       137   2e-33
Glyma11g01760.1                                                       137   4e-33
Glyma01g43720.2                                                       136   6e-33
Glyma12g02380.2                                                       135   8e-33
Glyma11g10040.1                                                       134   2e-32
Glyma01g43720.1                                                       132   6e-32

>Glyma12g02380.1 
          Length = 928

 Score =  137 bits (346), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/77 (89%), Positives = 73/77 (94%), Gaps = 1/77 (1%)

Query: 10  VLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 69
           V ENFRGNVQTRLRKL+EG+VQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI
Sbjct: 187 VEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 246

Query: 70  ACRSNDDKMVRLYLSNL 86
           ACRSNDDKM   YL++L
Sbjct: 247 ACRSNDDKMAE-YLASL 262


>Glyma11g01760.1 
          Length = 289

 Score =  137 bits (344), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/78 (87%), Positives = 73/78 (93%), Gaps = 1/78 (1%)

Query: 9   KVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIG 68
           +V ENFRGNVQTRLRKLNEGVVQATLLALAGLKRL+MTENVTSILSIDDMLPAVAQGAIG
Sbjct: 140 EVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMTENVTSILSIDDMLPAVAQGAIG 199

Query: 69  IACRSNDDKMVRLYLSNL 86
           IACRS+DDKM   Y++ L
Sbjct: 200 IACRSDDDKMAE-YIATL 216


>Glyma01g43720.2 
          Length = 286

 Score =  136 bits (342), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/77 (88%), Positives = 72/77 (93%), Gaps = 1/77 (1%)

Query: 10  VLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 69
           V ENFRGNVQTRLRKLNEGVVQATLLALAGLKRL+MTENVTSILSIDDMLPAVAQGAIGI
Sbjct: 122 VQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMTENVTSILSIDDMLPAVAQGAIGI 181

Query: 70  ACRSNDDKMVRLYLSNL 86
           ACRS+DDKM   Y+ +L
Sbjct: 182 ACRSDDDKMAE-YIDSL 197


>Glyma12g02380.2 
          Length = 350

 Score =  135 bits (341), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 69/77 (89%), Positives = 73/77 (94%), Gaps = 1/77 (1%)

Query: 10  VLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 69
           V ENFRGNVQTRLRKL+EG+VQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI
Sbjct: 186 VEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 245

Query: 70  ACRSNDDKMVRLYLSNL 86
           ACRSNDDKM   YL++L
Sbjct: 246 ACRSNDDKMAE-YLASL 261


>Glyma11g10040.1 
          Length = 350

 Score =  134 bits (337), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/77 (88%), Positives = 73/77 (94%), Gaps = 1/77 (1%)

Query: 10  VLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 69
           V ENFRGNVQTRLRKL+EG+VQATLLALAGLKRLNMTENV+SILSIDDMLPAVAQGAIGI
Sbjct: 186 VEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVSSILSIDDMLPAVAQGAIGI 245

Query: 70  ACRSNDDKMVRLYLSNL 86
           ACRSNDDKM   YL++L
Sbjct: 246 ACRSNDDKMAE-YLASL 261


>Glyma01g43720.1 
          Length = 356

 Score =  132 bits (333), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 68/77 (88%), Positives = 72/77 (93%), Gaps = 1/77 (1%)

Query: 10  VLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDDMLPAVAQGAIGI 69
           V ENFRGNVQTRLRKLNEGVVQATLLALAGLKRL+MTENVTSILSIDDMLPAVAQGAIGI
Sbjct: 192 VQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMTENVTSILSIDDMLPAVAQGAIGI 251

Query: 70  ACRSNDDKMVRLYLSNL 86
           ACRS+DDKM   Y+ +L
Sbjct: 252 ACRSDDDKMAE-YIDSL 267