Jatropha Genome Database

JcCB0389891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0389891.10 + phase: 1 /TE/partial
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g47820.2                                                        72   7e-13
Glyma20g27760.1                                                        70   2e-12
Glyma15g34200.1                                                        70   3e-12
Glyma01g21220.1                                                        69   3e-12
Glyma06g00210.1                                                        69   3e-12
Glyma12g20980.1                                                        69   4e-12
Glyma03g29350.2                                                        69   6e-12
Glyma0146s00220.1                                                      68   8e-12
Glyma13g12120.1                                                        66   3e-11
Glyma15g21390.1                                                        65   5e-11
Glyma07g33290.1                                                        60   2e-09
Glyma06g21930.1                                                        57   1e-08
Glyma10g37890.1                                                        55   8e-08
Glyma08g22780.1                                                        49   4e-06
Glyma11g30070.1                                                        49   4e-06

>Glyma06g47820.2 
          Length = 1402

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 10/132 (7%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 815 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 874

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
           RWF H            V  ++R   +  RGR K T  EV+ KDL +N ++  +V++R+ 
Sbjct: 875 RWFEHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTL 934

Query: 218 WKQRIHITITSL 229
           W++ IH  ++S+
Sbjct: 935 WRKLIHSQLSSV 946


>Glyma20g27760.1 
          Length = 1321

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 10/128 (7%)

Query: 108  MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
            + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 1191 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 1250

Query: 160  RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
            RWFGH            V  ++R   +  RGR K T  EV+ KDL +N ++  +V++R+ 
Sbjct: 1251 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTL 1310

Query: 218  WKQRIHIT 225
            W++ IH+ 
Sbjct: 1311 WRKLIHVA 1318


>Glyma15g34200.1 
          Length = 1627

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 10/131 (7%)

Query: 108  MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
            + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 1497 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 1556

Query: 160  RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
            RWFGH            V  ++R   +  RGR K T  EV+ KDL LN ++  +V++R+ 
Sbjct: 1557 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLELNDLDRSMVLDRTL 1616

Query: 218  WKQRIHITITS 228
            W++ IH+   +
Sbjct: 1617 WRKLIHVADPT 1627


>Glyma01g21220.1 
          Length = 313

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 10/128 (7%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H  K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 183 LYGTECWAVKSQHEKKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 242

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
           RWFGH            V  ++R   +  RGR K T  EV+ KDL +N ++  +V++R+ 
Sbjct: 243 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTL 302

Query: 218 WKQRIHIT 225
           W++ IH+ 
Sbjct: 303 WRKLIHVA 310


>Glyma06g00210.1 
          Length = 197

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 10/128 (7%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +++ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 67  LYGTECWAVKSQHENRVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 126

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
           RWFGH            V  ++R   +  RGR K T  EV+ KDL +N ++  +V++R+ 
Sbjct: 127 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTL 186

Query: 218 WKQRIHIT 225
           W++ IH+ 
Sbjct: 187 WRKLIHVA 194


>Glyma12g20980.1 
          Length = 933

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 10/128 (7%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DK +N+ I+++V VA + +K+ +  L
Sbjct: 803 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKTRNEAIRERVGVAPIVEKMVENRL 862

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
           RWFGH            V  ++R   +  RGR K T  EV+ KDL LN ++  +V++R+ 
Sbjct: 863 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLELNDLDRSMVLDRTL 922

Query: 218 WKQRIHIT 225
           W++ IH+ 
Sbjct: 923 WRKLIHVA 930


>Glyma03g29350.2 
          Length = 1588

 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 16/130 (12%)

Query: 108  MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
            + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 907  LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 966

Query: 160  RWFGHYPMXMTMCSGSXVXYID----RDAKMERGRLKTTXSEVVLKDLLLN-INADLVMN 214
            RWFGH          S V  +D    R     RGR K T  EV+ KDL +N ++  +V++
Sbjct: 967  RWFGHVE---RRSVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLD 1023

Query: 215  RSKWKQRIHI 224
            R+ W++ IH+
Sbjct: 1024 RTLWRKLIHL 1033


>Glyma0146s00220.1 
          Length = 885

 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 74/128 (57%), Gaps = 10/128 (7%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 755 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNETIRERVGVAPIVEKMVENRL 814

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSK 217
           RWFGH            V  ++R   +  RGR K T  EV+ KDL LN ++  ++++R+ 
Sbjct: 815 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLELNDLDRSMILDRTL 874

Query: 218 WKQRIHIT 225
           W + IH+ 
Sbjct: 875 WWKLIHVA 882


>Glyma13g12120.1 
          Length = 1073

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 9/108 (8%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ K  L
Sbjct: 348 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVKNRL 407

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN 206
           RWFGH            V  ++R   +  RGR K T  EV+ KDL LN
Sbjct: 408 RWFGHVERRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIKKDLELN 455


>Glyma15g21390.1 
          Length = 1523

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 5/121 (4%)

Query: 110  GLECYHVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHLRWFGHYP 166
             ++  H +K+ VAEM+MLRW+      DKI+N  I+++V V+ + +K+ +  LRWFGH  
Sbjct: 1400 AVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNGAIRERVGVSPIVEKMVENRLRWFGHVE 1459

Query: 167  MXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN-INADLVMNRSKWKQRIHI 224
                      V  ++R   +  RGR K T  EV+ KDL LN ++  +V++R+ W++ IH+
Sbjct: 1460 RRPVDSVVRRVDQMERRQTIRGRGRPKKTIREVIEKDLELNDLDRSMVLDRTLWRKLIHV 1519

Query: 225  T 225
             
Sbjct: 1520 A 1520


>Glyma07g33290.1 
          Length = 213

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 16/131 (12%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I++ V VA + +K+ K  L
Sbjct: 83  LYGTECWTVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIREMVGVAPIVEKMVKNRL 142

Query: 160 RWFGHYPMXMTMCSGSXVXYIDR----DAKMERGRLKTTXSEVVLKDLLLN-INADLVMN 214
           RWFGH          S V  +D+        +R R K T  EV+ KDL +N ++  +V++
Sbjct: 143 RWFGHVE---RRPVDSVVRRVDQMERRQTIRDRRRPKKTIREVIKKDLEINGLDRSMVLD 199

Query: 215 RSKWKQRIHIT 225
           R+ W++ IH+ 
Sbjct: 200 RTLWRKLIHVA 210


>Glyma06g21930.1 
          Length = 254

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 9/108 (8%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V +A + +K+ +  L
Sbjct: 106 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGIAPIVEKMVENRL 165

Query: 160 RWFGHYPMXMTMCSGSXVXYIDRDAKME-RGRLKTTXSEVVLKDLLLN 206
           RWFGH            V  ++R   +  R R K T  EV+ KDL LN
Sbjct: 166 RWFGHVERRPVDSVVRRVDQMERRQTIRGRERPKKTIREVIKKDLELN 213


>Glyma10g37890.1 
          Length = 479

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 8/65 (12%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 101 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 160

Query: 160 RWFGH 164
           RWFGH
Sbjct: 161 RWFGH 165


>Glyma08g22780.1 
          Length = 124

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 8/65 (12%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H +K+ VAEM+MLRW+      DKI+N+ I+++V VA + +K+ +  L
Sbjct: 33  LYGTECWAVKSQHENKVGVAEMRMLRWMCSKTRQDKIRNEAIRERVGVAPIVEKMVENRL 92

Query: 160 RWFGH 164
            W GH
Sbjct: 93  SWVGH 97


>Glyma11g30070.1 
          Length = 365

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 8/65 (12%)

Query: 108 MLGLECY-----HVHKMSVAEMKMLRWI---KFLDKIKNDHIQQKVQVAEVGDKIRKRHL 159
           + G EC+     H  K+ VAEM+ML W+      DKI+N  I+++V VA + +K+ +  L
Sbjct: 277 LYGTECWAVKSQHETKVGVAEMRMLWWMCGKTRQDKIRNGDIRERVGVAPIVEKMVENRL 336

Query: 160 RWFGH 164
           RWFGH
Sbjct: 337 RWFGH 341