Jatropha Genome Database

JcCB0387971.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0387971.20 + phase: 0 /partial
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g17040.1                                                       207   2e-54
Glyma10g02760.1                                                       205   8e-54
Glyma12g31540.1                                                       155   7e-39
Glyma13g38850.1                                                       155   1e-38
Glyma12g10120.1                                                       154   1e-38
Glyma11g18090.1                                                       154   1e-38
Glyma10g02740.1                                                       134   2e-32
Glyma01g24620.1                                                       114   3e-26

>Glyma02g17040.1 
          Length = 881

 Score =  207 bits (526), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 112/117 (95%), Gaps = 1/117 (0%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L DAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHV+GG L+GGR+VE EA++A
Sbjct: 231 LADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIA 290

Query: 62  VLDTAAGVWLDKNGLVTSSKTSKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVWLD+NG+V+SS+++KGH ++DPSLELMRRCRHA+A+VGV I++YGGLRG
Sbjct: 291 VLDTAAGVWLDRNGIVSSSRSNKGH-DYDPSLELMRRCRHAAAAVGVHIFIYGGLRG 346


>Glyma10g02760.1 
          Length = 936

 Score =  205 bits (522), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 94/117 (80%), Positives = 111/117 (94%), Gaps = 1/117 (0%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L DAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHV+GG L+GGR+VE EA++A
Sbjct: 231 LADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIA 290

Query: 62  VLDTAAGVWLDKNGLVTSSKTSKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVWLD+NG+V+SS+++KGH ++DP LELMRRCRHA+A+VGV I++YGGLRG
Sbjct: 291 VLDTAAGVWLDRNGIVSSSRSNKGH-DYDPPLELMRRCRHAAAAVGVHIFIYGGLRG 346


>Glyma12g31540.1 
          Length = 951

 Score =  155 bits (393), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 93/120 (77%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPSPRYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 302 LSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 361

Query: 62  VLDTAAGVWLDKNGLVTSSKT---SKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VTSS+T   S      D ++EL RRCRHA+A+VG  I++YGGLRG
Sbjct: 362 VLDTAAGVWCDIKSVVTSSRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 421


>Glyma13g38850.1 
          Length = 988

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 92/120 (76%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPSPRYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 299 LSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 358

Query: 62  VLDTAAGVWLDKNGLVTSSKT---SKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VTS +T   S      D ++EL RRCRHA+A+VG  I++YGGLRG
Sbjct: 359 VLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 418


>Glyma12g10120.1 
          Length = 1001

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 92/120 (76%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPSPRYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 303 LSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 362

Query: 62  VLDTAAGVWLDKNGLVTSSKT---SKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VTS +T   S      D ++EL RRCRHA+A++G  I++YGGLRG
Sbjct: 363 VLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRG 422


>Glyma11g18090.1 
          Length = 1010

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 92/120 (76%), Gaps = 3/120 (2%)

Query: 2   LGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVA 61
           L  AYGL  HR+G+WEW +APGVSPSPRYQHAAVFV ARLHVSGGAL GGR VE  ++VA
Sbjct: 311 LSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVA 370

Query: 62  VLDTAAGVWLDKNGLVTSSKT---SKGHTEHDPSLELMRRCRHASASVGVRIYVYGGLRG 118
           VLDTAAGVW D   +VTS +T   S      D ++EL RRCRHA+A++G  I++YGGLRG
Sbjct: 371 VLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRG 430


>Glyma10g02740.1 
          Length = 339

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 78/84 (92%), Gaps = 1/84 (1%)

Query: 35  VFVGARLHVSGGALKGGRAVESEAAVAVLDTAAGVWLDKNGLVTSSKTSKGHTEHDPSLE 94
           VFVGARLH +GG L+GGR+VE EA++AVLDTAAGVWLD+NG+V+SS+++KGH ++DP LE
Sbjct: 1   VFVGARLHATGGVLRGGRSVEGEASIAVLDTAAGVWLDRNGIVSSSRSNKGH-DYDPPLE 59

Query: 95  LMRRCRHASASVGVRIYVYGGLRG 118
           LMRRCRHA+A+VGV I++YGGLRG
Sbjct: 60  LMRRCRHAAAAVGVHIFIYGGLRG 83


>Glyma01g24620.1 
          Length = 111

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 3/110 (2%)

Query: 8   LLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVSGGALKGGRAVESEAAVAVLDTAA 67
           L  HR+G+WEW +APGVSPSPRYQHA VFV AR+HVSGGAL GGR VE  ++V VLD   
Sbjct: 1   LAKHRDGRWEWAIAPGVSPSPRYQHATVFVNARVHVSGGALGGGRMVEDTSSVVVLDIVV 60

Query: 68  GVWLDKNGLVTSSKTSKGHTE---HDPSLELMRRCRHASASVGVRIYVYG 114
           GVW D   +VTS +T +   +    D + EL R CRH++A+VG  I++YG
Sbjct: 61  GVWCDTKSVVTSPRTGRYSADVVGGDAAAELTRCCRHSAAAVGDLIFIYG 110