Jatropha Genome Database

JcCB0387971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0387971.10 + phase: 0 
         (50 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g34110.1                                                        60   4e-10

>Glyma09g34110.1 
          Length = 470

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/39 (69%), Positives = 33/39 (84%)

Query: 8   AGRKNDLLSGIRKEAEAGRLPSNVAAGMEELYQNYRNAV 46
           A  + +LL+GIRKE EAG LP+NVAAGMEE+Y NY+NAV
Sbjct: 112 AKNEQELLAGIRKEVEAGSLPANVAAGMEEVYNNYKNAV 150