Jatropha Genome Database

JcCB0384321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0384321.10 - phase: 2 /partial
         (176 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g26190.1                                                       219   1e-57
Glyma13g31130.1                                                       218   3e-57
Glyma08g45770.1                                                       217   6e-57
Glyma07g31840.1                                                       216   1e-56
Glyma15g08210.1                                                       216   1e-56
Glyma13g24630.1                                                       214   5e-56
Glyma07g31840.2                                                       210   8e-55
Glyma16g09330.1                                                       205   3e-53
Glyma02g34720.1                                                       198   2e-51
Glyma07g31840.3                                                       179   2e-45

>Glyma18g26190.1 
          Length = 245

 Score =  219 bits (557), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 115/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 43  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 102

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 103 SPDLSVLNLVIVKKGENDLPGLTDAEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 162

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G     + +  +P I  +++
Sbjct: 163 TFTTKAG-----KKVSKAPKIQRLVT 183


>Glyma13g31130.1 
          Length = 267

 Score =  218 bits (555), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 115/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 63  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 122

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 123 SPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 182

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G     + +  +P I  +++
Sbjct: 183 TFTTKNG-----KKVSKAPKIQRLVT 203


>Glyma08g45770.1 
          Length = 248

 Score =  217 bits (552), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 115/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 45  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 104

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGENDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 105 SPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 164

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G     + +  +P I  +++
Sbjct: 165 TFTTKAG-----KKVSKAPKIQRLVT 185


>Glyma07g31840.1 
          Length = 249

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 115/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 45  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 104

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 105 SPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 164

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G     + +  +P I  +++
Sbjct: 165 TFTTKAG-----KKVSKAPKIQRLVT 185


>Glyma15g08210.1 
          Length = 249

 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 115/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 45  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 104

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 105 SPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 164

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G     + +  +P I  +++
Sbjct: 165 TFTTKNG-----KKVSKAPKIQRLVT 185


>Glyma13g24630.1 
          Length = 249

 Score =  214 bits (544), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 114/146 (78%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 45  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 104

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 105 SPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 164

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TF TK+G     + +  +P I  +++
Sbjct: 165 TFITKAG-----KKVSKAPKIQRLVT 185


>Glyma07g31840.2 
          Length = 188

 Score =  210 bits (534), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 113/146 (77%), Gaps = 3/146 (2%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 45  FKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 104

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 105 SPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 164

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK+G       ++     VC++ 
Sbjct: 165 TFTTKAGKFP---EVHKFSICVCMLG 187


>Glyma16g09330.1 
          Length = 225

 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 111/146 (76%), Gaps = 5/146 (3%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVFKI GGCDKQGFPMKQGVLTPG V LLLHRGTPCF                 CIV
Sbjct: 21  FKGYVFKITGGCDKQGFPMKQGVLTPGCVHLLLHRGTPCFRGYGRRNGERRRKFVRGCIV 80

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLP LTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 81  SPDLSVLNLVIVKKGESDLPRLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 140

Query: 121 TFTTKSGNISLLRYIYNSPAIVCIIS 146
           TFTTK G     + +  +P I  +++
Sbjct: 141 TFTTKVG-----KKVSKAPKIQRLVT 161


>Glyma02g34720.1 
          Length = 145

 Score =  198 bits (504), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 102/127 (80%), Positives = 105/127 (82%), Gaps = 1/127 (0%)

Query: 1   FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIV 60
           FKGYVF I GGCDKQGFP+KQGVLTPGRVRLLLHRGTPCF                 CIV
Sbjct: 19  FKGYVFIITGGCDKQGFPIKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 78

Query: 61  SQDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 120
           S DLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSK DDVRKYVNTYRR
Sbjct: 79  SPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKLFNLSK-DDVRKYVNTYRR 137

Query: 121 TFTTKSG 127
           TFTTK+G
Sbjct: 138 TFTTKNG 144


>Glyma07g31840.3 
          Length = 187

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/128 (70%), Positives = 98/128 (76%), Gaps = 5/128 (3%)

Query: 19  MKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGEND 78
           MKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGE+D
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGESD 60

Query: 79  LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGNISLLRYIYNS 138
           LPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+G     + +  +
Sbjct: 61  LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAG-----KKVSKA 115

Query: 139 PAIVCIIS 146
           P I  +++
Sbjct: 116 PKIQRLVT 123