Jatropha Genome Database

JcCB0383651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0383651.10 + phase: 0 /partial
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03380.1                                                       107   3e-24
Glyma02g45430.1                                                       107   3e-24
Glyma13g28830.1                                                       103   5e-23
Glyma15g10220.1                                                       102   7e-23
Glyma08g42060.1                                                       101   2e-22
Glyma18g13270.1                                                        99   8e-22
Glyma17g31430.1                                                        97   3e-21
Glyma17g16910.1                                                        80   5e-16
Glyma14g03380.2                                                        57   4e-09
Glyma08g36110.1                                                        49   1e-06

>Glyma14g03380.1 
          Length = 178

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/60 (80%), Positives = 55/60 (91%)

Query: 1  MQFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          M+FHQYQVVGR LPTE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 4  MRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63


>Glyma02g45430.1 
          Length = 178

 Score =  107 bits (266), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/60 (80%), Positives = 55/60 (91%)

Query: 1  MQFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          M+FHQYQVVGR LPTE+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 4  MRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63


>Glyma13g28830.1 
          Length = 93

 Score =  103 bits (256), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 54/62 (87%)

Query: 2  QFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLLT 61
          +FHQYQVVGR LPTE D+HPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L + 
Sbjct: 5  RFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAIN 64

Query: 62 RY 63
           +
Sbjct: 65 EF 66


>Glyma15g10220.1 
          Length = 178

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 2  QFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          +FHQYQVVGR LPTE D+HPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 5  RFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 63


>Glyma08g42060.1 
          Length = 129

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 51/58 (87%)

Query: 3  FHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          FHQYQVVGR LPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 1  FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAI 58


>Glyma18g13270.1 
          Length = 178

 Score = 99.4 bits (246), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 50/57 (87%)

Query: 4  HQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          HQYQVVGR LPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 7  HQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAI 63


>Glyma17g31430.1 
          Length = 151

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 50/58 (86%)

Query: 3  FHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          FHQ QVVGR LPTE D+HPKIYRMKLWATNEV AKSKFWYFLRKLKKV+++  + L +
Sbjct: 1  FHQCQVVGRALPTEADQHPKIYRMKLWATNEVCAKSKFWYFLRKLKKVKKSNDQVLAI 58


>Glyma17g16910.1 
          Length = 64

 Score = 80.1 bits (196), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 1  MQFHQYQVVGRGLPTENDEHPKIYRMKLWATNEVRAKSKFWYFL 44
          + FHQYQVVGR LPT+ D+HPKIY+MKLW+TNEV AKSKFWYFL
Sbjct: 3  IHFHQYQVVGRALPTQPDQHPKIYQMKLWSTNEVFAKSKFWYFL 46


>Glyma14g03380.2 
          Length = 150

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 31/35 (88%)

Query: 26 MKLWATNEVRAKSKFWYFLRKLKKVRRAMAKYLLL 60
          MKLWATNEVRAKSKFWYFLRKLKKV+++  + L +
Sbjct: 1  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAI 35


>Glyma08g36110.1 
          Length = 26

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query: 8  VVGRGLPTENDEHPKIYRMKLWATNE 33
          VVGR LPTE D+HPKIYRM  WATN+
Sbjct: 1  VVGRALPTEADQHPKIYRMMFWATNK 26