Jatropha Genome Database
- JcCB0379211.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0379211.10 - phase: 0 /partial
(179 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g12610.2 355 2e-98
Glyma11g12610.1 355 2e-98
Glyma12g04820.1 350 3e-97
Glyma06g01520.1 345 1e-95
Glyma04g01470.1 343 7e-95
Glyma06g34860.1 64 1e-10
>Glyma11g12610.2
Length = 759
Score = 355 bits (911), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/179 (95%), Positives = 176/179 (98%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIH+LQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS
Sbjct: 155 PVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 214
Query: 61 KLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGANTQTGDRPFYDFLEGCLRHKAEMVIFE 120
KLVTSLTRG VRSPLAQCLLIRYTSQVIRESG NTQ+GDRPFYD+LE CLRHK+EMVIFE
Sbjct: 215 KLVTSLTRGNVRSPLAQCLLIRYTSQVIRESGNNTQSGDRPFYDYLESCLRHKSEMVIFE 274
Query: 121 AARAITELSGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 179
AARAITEL+GVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID
Sbjct: 275 AARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 333
>Glyma11g12610.1
Length = 887
Score = 355 bits (910), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/179 (95%), Positives = 176/179 (98%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIH+LQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS
Sbjct: 155 PVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 214
Query: 61 KLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGANTQTGDRPFYDFLEGCLRHKAEMVIFE 120
KLVTSLTRG VRSPLAQCLLIRYTSQVIRESG NTQ+GDRPFYD+LE CLRHK+EMVIFE
Sbjct: 215 KLVTSLTRGNVRSPLAQCLLIRYTSQVIRESGNNTQSGDRPFYDYLESCLRHKSEMVIFE 274
Query: 121 AARAITELSGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 179
AARAITEL+GVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID
Sbjct: 275 AARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 333
>Glyma12g04820.1
Length = 887
Score = 350 bits (899), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/179 (94%), Positives = 175/179 (97%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIH+LQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS
Sbjct: 155 PVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 214
Query: 61 KLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGANTQTGDRPFYDFLEGCLRHKAEMVIFE 120
KLVTSLTRG VRSPLAQCLL+ YTSQVIRESG NTQ+GDRPFYD+LE CLRHK+EMVIFE
Sbjct: 215 KLVTSLTRGNVRSPLAQCLLVCYTSQVIRESGNNTQSGDRPFYDYLESCLRHKSEMVIFE 274
Query: 121 AARAITELSGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 179
AARAITEL+GVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID
Sbjct: 275 AARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 333
>Glyma06g01520.1
Length = 882
Score = 345 bits (886), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/179 (93%), Positives = 175/179 (97%), Gaps = 1/179 (0%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHAL LLHQIRQNDRLAVS
Sbjct: 155 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALGLLHQIRQNDRLAVS 214
Query: 61 KLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGANTQTGDRPFYDFLEGCLRHKAEMVIFE 120
KLVTSLTRGTVRSPLAQCLLIRYTSQVI ESG NTQ+G+RPFYD+LE CLRHK++MVIFE
Sbjct: 215 KLVTSLTRGTVRSPLAQCLLIRYTSQVIHESG-NTQSGERPFYDYLESCLRHKSDMVIFE 273
Query: 121 AARAITELSGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 179
AARAITEL+GVTSRELTPAITVLQLFLSS+KPVLRFAAVRTLNKVAMTHPMAVTNCNID
Sbjct: 274 AARAITELNGVTSRELTPAITVLQLFLSSTKPVLRFAAVRTLNKVAMTHPMAVTNCNID 332
>Glyma04g01470.1
Length = 886
Score = 343 bits (879), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 167/179 (93%), Positives = 175/179 (97%), Gaps = 1/179 (0%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHAL LLHQIRQNDRLAVS
Sbjct: 155 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALGLLHQIRQNDRLAVS 214
Query: 61 KLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGANTQTGDRPFYDFLEGCLRHKAEMVIFE 120
KLVTSLTRGTVRSPLAQCLLIRYTSQVI ESG +TQ+G+RPFYD+LE CLRHK++MVIFE
Sbjct: 215 KLVTSLTRGTVRSPLAQCLLIRYTSQVIHESG-HTQSGERPFYDYLESCLRHKSDMVIFE 273
Query: 121 AARAITELSGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNID 179
AARAITEL+GVTSRELTPAITVLQLFLSS+KPVLRFAAVRTLNKVAMTHPMAVTNCNID
Sbjct: 274 AARAITELNGVTSRELTPAITVLQLFLSSTKPVLRFAAVRTLNKVAMTHPMAVTNCNID 332
>Glyma06g34860.1
Length = 260
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 14/81 (17%)
Query: 1 PVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVS 60
PVVASAALVSGIHLLQ E VQSRAAL+QFHAL LLH++ + LA+
Sbjct: 134 PVVASAALVSGIHLLQ--------------EVVQSRAALIQFHALGLLHRVYFQNYLALY 179
Query: 61 KLVTSLTRGTVRSPLAQCLLI 81
K+ ++P C +I
Sbjct: 180 KVFGKPWPPEEQAPFQSCSVI 200