Jatropha Genome Database

JcCB0376261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0376261.10 + phase: 1 /partial
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15820.1                                                       224   4e-59
Glyma05g05490.1                                                       224   7e-59

>Glyma17g15820.1 
          Length = 293

 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 110/166 (66%), Positives = 131/166 (78%), Gaps = 2/166 (1%)

Query: 1   LPGFTRSVYKSDHALITPESHVFSPLP--TNTLGAYLITPAMGSHFVMYLAKMQGKSRSE 58
           LPGFTRSVYKS+HAL++PESHV+ PLP   +T GAYLI+P MGSHFVMYLAK++ KS+S 
Sbjct: 52  LPGFTRSVYKSNHALVSPESHVYGPLPDWIDTSGAYLISPEMGSHFVMYLAKLKEKSKSG 111

Query: 59  LPPYDVERFIFMVQGXXXXXXXXXXXHELMVDSYAYLPPNFKHSLECDAFATLVVFERRY 118
           LP   VERFIF++QG             L VDSYAY PPNF+HS+ECD  AT+VVFERRY
Sbjct: 112 LPLPGVERFIFVLQGAVTLTNAAGVSQLLKVDSYAYFPPNFEHSIECDTPATIVVFERRY 171

Query: 119 ASLDDLITEQIVGSTDKQPLLETPGEVFELRKLLPQTLPYDFNIHV 164
           + L + I E +VGSTDKQPLLETPGE+FELRKL+P +L YDFNIH+
Sbjct: 172 SPLPNHIPEPLVGSTDKQPLLETPGEIFELRKLIPTSLAYDFNIHI 217


>Glyma05g05490.1 
          Length = 294

 Score =  224 bits (570), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 110/166 (66%), Positives = 130/166 (78%), Gaps = 2/166 (1%)

Query: 1   LPGFTRSVYKSDHALITPESHVFSPLP--TNTLGAYLITPAMGSHFVMYLAKMQGKSRSE 58
           LPGFTRSVYKS+HALI+PESHV+ PLP   NTLG YLI+P MGSHFVMYLAK++  S+S 
Sbjct: 53  LPGFTRSVYKSNHALISPESHVYGPLPDWINTLGTYLISPEMGSHFVMYLAKLKENSKSG 112

Query: 59  LPPYDVERFIFMVQGXXXXXXXXXXXHELMVDSYAYLPPNFKHSLECDAFATLVVFERRY 118
           LP   VERFIF++QG             L VDSYAY PPNF+HS+ECDA AT+V+ ERRY
Sbjct: 113 LPLPGVERFIFVLQGAVTLTNATGVSQLLKVDSYAYFPPNFEHSIECDAPATIVLIERRY 172

Query: 119 ASLDDLITEQIVGSTDKQPLLETPGEVFELRKLLPQTLPYDFNIHV 164
           + L + I E +VGSTDKQPLLETPGE+FELRKL+P +L YDFNIH+
Sbjct: 173 SPLPNHIPEPLVGSTDKQPLLETPGEIFELRKLIPTSLAYDFNIHI 218