Jatropha Genome Database

JcCB0375071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0375071.10 + phase: 2 /partial
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g01320.1                                                       168   1e-42
Glyma17g10570.3                                                       166   6e-42
Glyma17g10570.2                                                       166   6e-42
Glyma17g10570.1                                                       166   6e-42

>Glyma05g01320.1 
          Length = 436

 Score =  168 bits (425), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/89 (83%), Positives = 83/89 (93%)

Query: 17  VLVDDRNLRVADFAQFWAIAKRSGYEVYISEATYKDPVGCAARNVHGFTLDEIKSMAEQW 76
           ++VDDRNLRVADF+QFWA AKRSGYEVYI EATYKDPVGCAARNVHGFT ++I+ M++QW
Sbjct: 312 IIVDDRNLRVADFSQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQW 371

Query: 77  EEAPVLYLQLDIKSLFHGDDLKESGIQEV 105
           EEAP LYLQLD+KSLFHGDDLKES IQEV
Sbjct: 372 EEAPSLYLQLDVKSLFHGDDLKESRIQEV 400


>Glyma17g10570.3 
          Length = 552

 Score =  166 bits (419), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 74/89 (83%), Positives = 82/89 (92%)

Query: 17  VLVDDRNLRVADFAQFWAIAKRSGYEVYISEATYKDPVGCAARNVHGFTLDEIKSMAEQW 76
           ++VDDRNLRVADFAQFWA AKRSGYEVYI EATYKDPVGCAARNVHGFT ++I+ M++QW
Sbjct: 363 IIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQW 422

Query: 77  EEAPVLYLQLDIKSLFHGDDLKESGIQEV 105
           EEA  LYLQLD+KSLFHGDDLKES IQEV
Sbjct: 423 EEASSLYLQLDVKSLFHGDDLKESRIQEV 451


>Glyma17g10570.2 
          Length = 550

 Score =  166 bits (419), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 74/89 (83%), Positives = 82/89 (92%)

Query: 17  VLVDDRNLRVADFAQFWAIAKRSGYEVYISEATYKDPVGCAARNVHGFTLDEIKSMAEQW 76
           ++VDDRNLRVADFAQFWA AKRSGYEVYI EATYKDPVGCAARNVHGFT ++I+ M++QW
Sbjct: 363 IIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQW 422

Query: 77  EEAPVLYLQLDIKSLFHGDDLKESGIQEV 105
           EEA  LYLQLD+KSLFHGDDLKES IQEV
Sbjct: 423 EEASSLYLQLDVKSLFHGDDLKESRIQEV 451


>Glyma17g10570.1 
          Length = 634

 Score =  166 bits (419), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 74/89 (83%), Positives = 82/89 (92%)

Query: 17  VLVDDRNLRVADFAQFWAIAKRSGYEVYISEATYKDPVGCAARNVHGFTLDEIKSMAEQW 76
           ++VDDRNLRVADFAQFWA AKRSGYEVYI EATYKDPVGCAARNVHGFT ++I+ M++QW
Sbjct: 363 IIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQW 422

Query: 77  EEAPVLYLQLDIKSLFHGDDLKESGIQEV 105
           EEA  LYLQLD+KSLFHGDDLKES IQEV
Sbjct: 423 EEASSLYLQLDVKSLFHGDDLKESRIQEV 451