Jatropha Genome Database

JcCB0373961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0373961.10 + phase: 1 /pseudo/partial
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g00700.2                                                        97   5e-21
Glyma17g00700.1                                                        97   5e-21
Glyma11g32330.1                                                        82   1e-16
Glyma01g34360.1                                                        77   4e-15
Glyma19g23430.1                                                        51   3e-07

>Glyma17g00700.2 
          Length = 219

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 63/94 (67%)

Query: 1   FERLNPLHYXXXXXXXXXXXXXSFAILLYLEEKYPQKALLPDDIQQRALNLQAASIITSS 60
           F +LNP+               SFAI++YLE+KYP   LLP DI +RA+N QAAS+++S+
Sbjct: 52  FLQLNPVGCVPVLVDDHVVLYDSFAIIMYLEDKYPHNPLLPHDIYKRAINFQAASVVSST 111

Query: 61  MQPLHMVSLQKYMEEKIGPGEPLLWSQSIIEKGL 94
           +QPLH +SL  Y+ EK+GP E L W+QSII +G 
Sbjct: 112 IQPLHNLSLLNYIGEKVGPDEKLPWAQSIIRRGF 145


>Glyma17g00700.1 
          Length = 219

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 63/94 (67%)

Query: 1   FERLNPLHYXXXXXXXXXXXXXSFAILLYLEEKYPQKALLPDDIQQRALNLQAASIITSS 60
           F +LNP+               SFAI++YLE+KYP   LLP DI +RA+N QAAS+++S+
Sbjct: 52  FLQLNPVGCVPVLVDDHVVLYDSFAIIMYLEDKYPHNPLLPHDIYKRAINFQAASVVSST 111

Query: 61  MQPLHMVSLQKYMEEKIGPGEPLLWSQSIIEKGL 94
           +QPLH +SL  Y+ EK+GP E L W+QSII +G 
Sbjct: 112 IQPLHNLSLLNYIGEKVGPDEKLPWAQSIIRRGF 145


>Glyma11g32330.1 
          Length = 151

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 1   FERLNPLHYXXXXXXXXXXXXXSFAILLYLEEKYPQKALLPDDIQQRALNLQAASIITSS 60
           F +LNP+ +             S AI++YLE+KY     LP DI QRA+N QAA+I++SS
Sbjct: 48  FLKLNPIGFVPVLVDGDSVIVDSLAIIMYLEDKYLDPPQLPHDIHQRAINFQAATIVSSS 107

Query: 61  MQPLHMVSLQKYMEEKIGPGEPLLWSQSIIEKGLL 95
           +QP    +L KY+ EK+G  E L W+QS+I K  +
Sbjct: 108 IQPFQNYTL-KYIGEKVGADEKLPWTQSVIGKSFM 141


>Glyma01g34360.1 
          Length = 257

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 61/118 (51%), Gaps = 25/118 (21%)

Query: 1   FERLNPLHYXXXXXXXXXXXXXSFAILL------------------------YLEEKYPQ 36
           FERLNPLHY             S+AI L                        +LEEKY Q
Sbjct: 64  FERLNPLHYVPVLVDDNVVVSDSYAIFLVENMDPQDGIEWEYYQVVWISDAQHLEEKYTQ 123

Query: 37  KALLPDDIQQRALNLQAASIITSSMQPLHMVSLQKYMEEKIGPGEPLLWSQSIIEKGL 94
           K LLP D Q RALNLQ ASII SS+QPLHM+++ K M EK+   E   W+Q  I+KG 
Sbjct: 124 KPLLPVDPQLRALNLQVASIIHSSIQPLHMLNVLKDM-EKMFCAESKPWAQFTIDKGF 180


>Glyma19g23430.1 
          Length = 150

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 1   FERLNPLHYXXXXXXXXXXXXXSFAIL-LYLEEKYPQKALLPDDIQQRALNLQAASIITS 59
           F +LNP+ +             SFAI+ ++         +   +         +A I++S
Sbjct: 40  FLKLNPIGFVPVLVDGDSVIVYSFAIISIWKISILTLLCIFTKEPSISKYYCNSAVIVSS 99

Query: 60  SMQPLHMVSLQKYMEEKIGPGEPLLWSQSIIEKGLLGKH-FRYRC 103
           S+QP    ++ KY+ EK+G  E L W+QS+I KG +G+   +Y C
Sbjct: 100 SIQPFQNYTVVKYIGEKVGVDEKLPWTQSVIGKGFMGEFKLKYHC 144