Jatropha Genome Database

JcCB0372241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0372241.10 + phase: 0 /pseudo/partial
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43710.1                                                       201   1e-52
Glyma20g38400.1                                                       200   5e-52
Glyma18g52290.1                                                       199   6e-52
Glyma02g10570.1                                                       199   1e-51
Glyma08g17200.1                                                       112   1e-25
Glyma08g16970.1                                                       103   8e-23
Glyma15g41990.1                                                        94   3e-20

>Glyma10g43710.1 
          Length = 536

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 116/140 (82%), Gaps = 1/140 (0%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A TV+GAL GL+TFSQLC F++TT  V++   PW+I+D+PRFPYRGL++DTSRHYLP+ V
Sbjct: 140 ANTVFGALRGLETFSQLCSFDYTTKTVQIYKAPWSILDKPRFPYRGLMLDTSRHYLPVDV 199

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSISERYTFADAAEIVRQVV 120
           I+++I+SM+YAKLNVLHWHI+D QSFPLE+P+YP LW G+Y+  ERYT  DA EIV    
Sbjct: 200 IKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGSYTKWERYTVEDAYEIV-NFS 258

Query: 121 SAQGIHVLAEIDVPGHALSW 140
             +GI+V+AE+DVPGHA SW
Sbjct: 259 KMRGINVMAEVDVPGHAASW 278


>Glyma20g38400.1 
          Length = 526

 Score =  200 bits (508), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 89/140 (63%), Positives = 115/140 (82%), Gaps = 1/140 (0%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A TV+GAL GL+TFSQLC F++TT  V++   PW+I D+PRFPYRGL++DTSRHYLP+ V
Sbjct: 130 ANTVFGALRGLETFSQLCSFDYTTKTVQIYKAPWSIRDKPRFPYRGLMLDTSRHYLPVDV 189

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSISERYTFADAAEIVRQVV 120
           I+++I+SM+YAKLNVLHWHI+D QSFPLE+P+YP LW G+Y+  ERYT  DA EIV    
Sbjct: 190 IKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGSYTEWERYTVEDAYEIV-NFS 248

Query: 121 SAQGIHVLAEIDVPGHALSW 140
             +GI+V+AE+D+PGHA SW
Sbjct: 249 KMRGINVMAEVDIPGHAASW 268


>Glyma18g52290.1 
          Length = 565

 Score =  199 bits (507), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 91/140 (65%), Positives = 114/140 (81%), Gaps = 1/140 (0%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A TVYGAL GL+TFSQLC F++TT  V++   PW+I D+PRF YRGL++DTSRHYLP+ V
Sbjct: 169 ANTVYGALRGLETFSQLCSFDYTTKTVKIYKAPWSIQDKPRFAYRGLMLDTSRHYLPIDV 228

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSISERYTFADAAEIVRQVV 120
           I+++I+SM+YAKLNVLHWHI+D QSFPLEIP+YP LW G+Y+  ERYT  DA EIV    
Sbjct: 229 IKQIIESMSYAKLNVLHWHIIDEQSFPLEIPTYPNLWKGSYTKWERYTVEDAYEIV-SFA 287

Query: 121 SAQGIHVLAEIDVPGHALSW 140
             +GI+V+AE+DVPGHA SW
Sbjct: 288 KMRGINVMAEVDVPGHAESW 307


>Glyma02g10570.1 
          Length = 555

 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 90/140 (64%), Positives = 114/140 (81%), Gaps = 1/140 (0%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A TVYGAL GL+TFSQLC F++TT  V++   PW+I D+PRF YRGL++DTSRHYLP+ V
Sbjct: 159 ANTVYGALRGLETFSQLCSFDYTTKTVKIYKAPWSIQDKPRFAYRGLMLDTSRHYLPINV 218

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSISERYTFADAAEIVRQVV 120
           I+++I+SM+YAKLNVLHWHI+D QSFPLE+P+YP LW G+Y+  ERYT  DA EIV    
Sbjct: 219 IKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGSYTKWERYTVEDAYEIV-NFA 277

Query: 121 SAQGIHVLAEIDVPGHALSW 140
             +GI+V+AE+DVPGHA SW
Sbjct: 278 KMRGINVMAEVDVPGHAESW 297


>Glyma08g17200.1 
          Length = 578

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 88/141 (62%), Gaps = 7/141 (4%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A+T +GA+ GL+TFSQL + N T   V V +  W   D P + +RG+++DTSR+Y P+  
Sbjct: 139 AKTTWGAMRGLETFSQLAWGNPTCVAVGVHL--W---DSPLYAHRGIMLDTSRNYFPVKD 193

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-NGAYSISERYTFADAAEIVRQV 119
           + + +++M+  KLNV HWH+ D+QSFPL +PS P L   GAY+    Y+  D   +V   
Sbjct: 194 LLRTVEAMSMNKLNVFHWHVTDSQSFPLVLPSEPALAEKGAYASHMVYSPEDVKRVVEFG 253

Query: 120 VSAQGIHVLAEIDVPGHALSW 140
           +   G+ V+ EID PGH  SW
Sbjct: 254 LD-HGVRVMPEIDSPGHTGSW 273


>Glyma08g16970.1 
          Length = 585

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 87/141 (61%), Gaps = 7/141 (4%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A+TV+GA+ GL+TFSQL + + T   V V      + D P + +RG+++DT+R+Y P+  
Sbjct: 142 AKTVWGAMRGLETFSQLAWGHPTQVPVGV-----HVCDSPLYAHRGVMVDTARNYYPVKD 196

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKL-WNGAYSISERYTFADAAEIVRQV 119
           + + + +++  KLNVLH H+ D +SFPL +PS P L   GAY+    Y+  D  ++V   
Sbjct: 197 LMRTVKALSMNKLNVLHLHLTDAESFPLVLPSEPALAEKGAYAPHMVYSPKDVKKLVEFG 256

Query: 120 VSAQGIHVLAEIDVPGHALSW 140
           +   G+ ++ EID PGH  SW
Sbjct: 257 LD-HGVRIIPEIDTPGHTASW 276


>Glyma15g41990.1 
          Length = 534

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 26/156 (16%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A+T +GA+ GL+TFSQL + N T   V V      ++D P + +RG+++DTSR+Y P+  
Sbjct: 86  AKTTWGAMRGLETFSQLAWGNPTWIAVGV-----QVLDSPLYAHRGIMLDTSRNYFPVKD 140

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKL-WNGAYSISERYTFADAAEIVR-- 117
           + + +++M+  KLNV HWH     SFPL +P  P L   GAYS    Y+  D   +V   
Sbjct: 141 LLRTVEAMSMNKLNVFHWH-----SFPLVLPLEPALAEKGAYSSHMVYSPEDVKRVVEFV 195

Query: 118 -------------QVVSAQGIHVLAEIDVPGHALSW 140
                        +     G+ V+ EID PGH  SW
Sbjct: 196 SLFSPLFFYNFLHKTNIDDGVRVMPEIDSPGHTGSW 231