Jatropha Genome Database

JcCB0370021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0370021.10 - phase: 0 
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g12510.1                                                       155   2e-38
Glyma10g33710.2                                                        91   3e-19
Glyma10g33710.1                                                        91   4e-19
Glyma02g09630.2                                                        89   2e-18
Glyma02g09630.1                                                        89   2e-18
Glyma10g22680.1                                                        70   6e-13
Glyma20g33880.1                                                        69   2e-12

>Glyma20g12510.1 
          Length = 262

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 96/131 (73%), Gaps = 9/131 (6%)

Query: 1   MGLCY-NPFPPSCRLQVVDSSRQLKNADNXXXXXXXXXXXRPFNGFRRASPKLFAYYGLK 59
           M  CY NP P S  L + D SRQ K               + F+G  R+S K+ A+YGL 
Sbjct: 1   MASCYFNPIPTSSHLILADLSRQFK-------IPKLLHRKKRFDGSPRSS-KIAAFYGLT 52

Query: 60  TPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEELIKVTYNNGN 119
           TPPYELDALEPYMSK+T++MHWGEYH+ ++E LNK+L KDD+LYGYT++EL+KVTYNNGN
Sbjct: 53  TPPYELDALEPYMSKRTIDMHWGEYHQNFIEGLNKQLEKDDILYGYTLDELVKVTYNNGN 112

Query: 120 PLPQFNNAAQV 130
           PLP+FNNAA+V
Sbjct: 113 PLPEFNNAAEV 123


>Glyma10g33710.2 
          Length = 210

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 45  FRRASPKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYG 104
            ++  PK+ A + LK PPY L+ LEP MS++TLE HWG++H+ YVE L K++   + L G
Sbjct: 17  IKKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTE-LDG 75

Query: 105 YTMEELIKVTYNNGNPLPQFNNAAQV 130
            ++EE+I  +YN G+ LP FNNAAQV
Sbjct: 76  KSLEEIIVTSYNKGDILPAFNNAAQV 101


>Glyma10g33710.1 
          Length = 244

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 45  FRRASPKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYG 104
            ++  PK+ A + LK PPY L+ LEP MS++TLE HWG++H+ YVE L K++   + L G
Sbjct: 17  IKKEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQIVGTE-LDG 75

Query: 105 YTMEELIKVTYNNGNPLPQFNNAAQV 130
            ++EE+I  +YN G+ LP FNNAAQV
Sbjct: 76  KSLEEIIVTSYNKGDILPAFNNAAQV 101


>Glyma02g09630.2 
          Length = 310

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 51  KLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEEL 110
           K+ A + LK PPY L ALEP MS++TLE HWG++HR YV+ LN+++   D L G ++E  
Sbjct: 49  KITAKFELKPPPYPLSALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTD-LDGNSLENT 107

Query: 111 IKVTYNNGNPLPQFNNAAQV 130
           I +TYN G+ LP FNNAAQ 
Sbjct: 108 IVITYNKGDILPAFNNAAQA 127


>Glyma02g09630.1 
          Length = 313

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 51  KLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEEL 110
           K+ A + LK PPY L ALEP MS++TLE HWG++HR YV+ LN+++   D L G ++E  
Sbjct: 52  KITAKFELKPPPYPLSALEPIMSQETLEYHWGKHHRTYVDNLNRQIDGTD-LDGNSLENT 110

Query: 111 IKVTYNNGNPLPQFNNAAQV 130
           I +TYN G+ LP FNNAAQ 
Sbjct: 111 IVITYNKGDILPAFNNAAQA 130


>Glyma10g22680.1 
          Length = 272

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 66  DALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEELIKVTYNNGNPLPQFN 125
           ++LEP MS++T+E HWG++HR YV+ LN+++   D L G ++E+ + + YN G+ LP FN
Sbjct: 23  NSLEPIMSEETIEYHWGKHHRTYVDNLNRQIDGTD-LDGNSLEDTMVILYNKGDILPAFN 81

Query: 126 NAAQ 129
           NAAQ
Sbjct: 82  NAAQ 85


>Glyma20g33880.1 
          Length = 177

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%)

Query: 50  PKLFAYYGLKTPPYELDALEPYMSKKTLEMHWGEYHRGYVEELNKELAKDDVLYGYTMEE 109
           PK+ A + LK PPY L+ LEP MS++TLE HWG++H+ YVE L K++   + L G ++EE
Sbjct: 2   PKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTE-LDGKSLEE 60

Query: 110 LIKVTYN 116
           +I  +YN
Sbjct: 61  IIVTSYN 67