Jatropha Genome Database

JcCB0369881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0369881.10 + phase: 0 /pseudo/partial
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38720.1                                                       442   e-124
Glyma10g43990.1                                                       441   e-124
Glyma03g03200.1                                                       441   e-124
Glyma19g29950.1                                                       168   6e-42
Glyma11g12620.1                                                       159   2e-39
Glyma02g26150.1                                                       111   5e-25
Glyma02g17740.1                                                       100   2e-21
Glyma04g34070.1                                                        86   4e-17
Glyma09g15500.1                                                        82   7e-16

>Glyma20g38720.1 
          Length = 740

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/237 (89%), Positives = 220/237 (92%), Gaps = 4/237 (1%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           EEDLK FRQWGSRTPGHPENFET G+EVTTGPLGQGIANAVGLALAEKHLAAR+NKPDNE
Sbjct: 161 EEDLKEFRQWGSRTPGHPENFETVGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNE 220

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTYVILGDGCQMEGI+NEACSLAGHWGLGKLIA YDDNHISIDGDT IAFTE+VD+
Sbjct: 221 IVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIALYDDNHISIDGDTEIAFTENVDQ 280

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPT+IKVTTTIG+GSPNKANSYSVHG
Sbjct: 281 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHG 340

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME-*PKFAEYE 236
           SALG KEVDATRKNLGWPYEPFHVPEDVKKHWSRH P G   +K   E   KFAEYE
Sbjct: 341 SALGTKEVDATRKNLGWPYEPFHVPEDVKKHWSRHTPEG---AKLEAEWNAKFAEYE 394


>Glyma10g43990.1 
          Length = 742

 Score =  441 bits (1135), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/237 (89%), Positives = 220/237 (92%), Gaps = 4/237 (1%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           E+DLK FRQWGSRTPGHPENFET GVEVTTGPLGQGIANAVGLALAEKHLAAR+NKPDNE
Sbjct: 163 EQDLKEFRQWGSRTPGHPENFETLGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNE 222

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTYVILGDGCQMEGI+NEACSLAGHWGLGKLIA YDDNHISIDGDT IAFTE+VD+
Sbjct: 223 IVDHYTYVILGDGCQMEGISNEACSLAGHWGLGKLIALYDDNHISIDGDTEIAFTENVDQ 282

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIG+GSPNKANSYSVHG
Sbjct: 283 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGFGSPNKANSYSVHG 342

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME-*PKFAEYE 236
           SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRH P G   +K   E   KF EYE
Sbjct: 343 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHTPEG---AKLEAEWNAKFVEYE 396


>Glyma03g03200.1 
          Length = 731

 Score =  441 bits (1133), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/236 (89%), Positives = 217/236 (91%), Gaps = 2/236 (0%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           EEDL+ FRQWGSRTPGHPENFETPG+EVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE
Sbjct: 152 EEDLREFRQWGSRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 211

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTY ILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDG+T IAFTESVD 
Sbjct: 212 IVDHYTYAILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTEIAFTESVDS 271

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFEGLGWHVIWVKNGN GYD+IRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG
Sbjct: 272 RFEGLGWHVIWVKNGNNGYDDIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 331

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           SALGAKEVDATR+NLGW +EPFHVPEDVKKHWSRH P G           KFAEYE
Sbjct: 332 SALGAKEVDATRQNLGWSHEPFHVPEDVKKHWSRHTPEGAALEAEWNA--KFAEYE 385


>Glyma19g29950.1 
          Length = 424

 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/220 (46%), Positives = 117/220 (53%), Gaps = 57/220 (25%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           EEDLK FRQWG+R PGHP NFE   +EVTTGP GQGIAN V                   
Sbjct: 48  EEDLKEFRQWGTRVPGHPMNFEPFRIEVTTGPPGQGIANVV------------------- 88

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
                                           G  +A YDDNHISI GD  I FT +VD+
Sbjct: 89  --------------------------------GLALALYDDNHISIGGDPEIIFTANVDQ 116

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
            FE L WHVI VKN NTGY EI A IKEAK +K K TLIKVTTT+G+ SP+KANSYSV  
Sbjct: 117 CFEALRWHVIRVKNENTGYVEIHATIKEAKVIKHKSTLIKVTTTVGFSSPSKANSYSVQA 176

Query: 181 SALGA--KEVDATRKNLGWPYE-PFHVPE---DVKKHWSR 214
           SAL    K +   +   GW    P + PE   DV ++ S+
Sbjct: 177 SALVVELKVIITGKFPSGWAKALPTYTPENPTDVTRNLSK 216


>Glyma11g12620.1 
          Length = 338

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 108/210 (51%), Gaps = 66/210 (31%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           EEDLK FRQWGSR PGHP NFE  G+EVTTGP  QGIAN VGLA                
Sbjct: 112 EEDLKEFRQWGSRAPGHPTNFEPLGIEVTTGPPRQGIANVVGLA---------------- 155

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
                                              +  YDDNHISIDGD  I FT ++D+
Sbjct: 156 -----------------------------------LVLYDDNHISIDGDPEIVFTANIDQ 180

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
            FE L WHVI VKN NTGY EIRAAIKEAKA+K K TLI            KANSYSVH 
Sbjct: 181 HFEALRWHVIQVKNENTGYVEIRAAIKEAKAIKHKSTLI------------KANSYSVHA 228

Query: 181 SALGA--KEVDATRKNLGWPYE-PFHVPED 207
           SAL A  K +   +   GW    P + PE+
Sbjct: 229 SALAAELKAIITGKLPAGWAKALPTYTPEN 258


>Glyma02g26150.1 
          Length = 317

 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 55/63 (87%)

Query: 157 TLIKVTTTIGYGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHV 216
           T+ +VTTTIG+ SPNK NSYSVHGSALGAKEVDATRKNLG PYE FHV EDVKKHWSRH 
Sbjct: 1   TISQVTTTIGFASPNKVNSYSVHGSALGAKEVDATRKNLGRPYELFHVLEDVKKHWSRHT 60

Query: 217 PRG 219
           P G
Sbjct: 61  PEG 63


>Glyma02g17740.1 
          Length = 202

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 157 TLIKVTTTIGYGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKH 211
           ++ +VTTTI +GSPNKANS SVHGSALGAKEVDA+RKNLGWPY PFHVPEDVKKH
Sbjct: 145 SISQVTTTIEFGSPNKANSNSVHGSALGAKEVDASRKNLGWPYNPFHVPEDVKKH 199


>Glyma04g34070.1 
          Length = 329

 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 54/81 (66%), Gaps = 17/81 (20%)

Query: 157 TLIKVTTTIGYGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHV 216
           T+ +VTTTIG+ SPNKANSYSVHGSALGA EVDATRKNLGW             HWSRH 
Sbjct: 238 TISQVTTTIGFASPNKANSYSVHGSALGAIEVDATRKNLGW-------------HWSRHT 284

Query: 217 PRGCYRSKSRME-*PKFAEYE 236
           P G   +K  +E   KF EYE
Sbjct: 285 PEG---AKFEVEWNAKFVEYE 302


>Glyma09g15500.1 
          Length = 308

 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/43 (88%), Positives = 39/43 (90%)

Query: 161 VTTTIGYGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFH 203
           VTTTIG+ SPNKANSYSVHGSALGAKEVDAT KNL  PYEPFH
Sbjct: 166 VTTTIGFASPNKANSYSVHGSALGAKEVDATMKNLRCPYEPFH 208