Jatropha Genome Database

JcCB0367641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0367641.10 - phase: 0 /pseudo/partial
         (271 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g34980.1                                                       115   3e-26
Glyma04g05280.1                                                       100   2e-21
Glyma14g10530.1                                                        79   4e-15

>Glyma17g34980.1 
          Length = 713

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 4/224 (1%)

Query: 10  KSQNGIDGGKPTPFSQNYLSHSVKVKDAGDSDKKNYSS-RVP-NLRLDTRNQSEEKLEVC 67
           K+   +DG K TPF      +SV V++ GD D   +SS  +P +LR D RN +E    V 
Sbjct: 138 KTMESVDGKKFTPFGARNFCYSVAVQNDGDKDPTQFSSCSLPVDLRKDVRNGNEANPHVS 197

Query: 68  VSSRD--HSVRSSTKFATRKKIASLGDAYQNQQNPDLPGANFSRFCENDDFLQQESTAFL 125
            S R    SV++++       +        N ++ D    N SR  ++D  LQ+E  A  
Sbjct: 198 SSRRKPKMSVKNNSSGEIIDSLMMQAKVIPNLEDQDYSVPNISRLHQDDTCLQKECVAGS 257

Query: 126 QQDNSGNGEGVPELTREIEKGNIFCPRSDSLSREDCSSPNKPEIDCELSGEKTCRSLQFG 185
           Q ++  +G+ +   TR+I+ GN   PR    S  + + P +   D E     T   +Q G
Sbjct: 258 QSNDVEHGDDLLNSTRDIDNGNALVPRGCFHSAANQTRPLEATNDAEYHDTGTGGPIQKG 317

Query: 186 NGDKSDDVSETSMVDSISALDISPDEVVGIIGQKHFWKARRAIV 229
           N D+ D++S+ S V ++S+L +SPD+VVGI+GQKHFWKARR I 
Sbjct: 318 NFDERDNISKISTVTNLSSLIVSPDDVVGILGQKHFWKARRKIA 361


>Glyma04g05280.1 
          Length = 714

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 12/223 (5%)

Query: 10  KSQNGIDGGKPTPFSQNYLSHSVKVKDAGDSDKKNYSSRVPNLRLDTRNQSEEKLEVCVS 69
           KS    +G K TP    Y   S+  +   + D K + S V N+R D R++ +   +V  +
Sbjct: 139 KSVESFNGKKLTPTGSRYFGGSISGQSDCERDPKQFGSSVVNMRKDVRSEIDVLPQVS-T 197

Query: 70  SRDHSVRSSTKFATRKKIASL---GDAYQNQQNPDLPGANFSRFCENDDFLQQESTAFLQ 126
           S++ +  S    +TR+ I +L        N++  D   + F+R  + +  LQ E     +
Sbjct: 198 SKEQASMSVRSISTRENIHTLLRQAKVTPNREFQDCHVSKFNRLQQGETCLQLECGVESR 257

Query: 127 QDNSGNGEGVPELTREIEKGNIFCPRSDSLSREDCSSPNKPEIDCELSGEKTCRSLQFGN 186
            ++ G+   + E  RE +KGN   P ++  S  D  +      D E    +    +Q GN
Sbjct: 258 SNDIGDNGCLVESARETDKGN--APTANQTSPADAIN------DTEHHDTRMGSPIQRGN 309

Query: 187 GDKSDDVSETSMVDSISALDISPDEVVGIIGQKHFWKARRAIV 229
            ++SD+ S+ SMV+++S + ISPD+VVGIIGQKHFWKARRAI 
Sbjct: 310 LNESDNASKISMVENLSTVRISPDDVVGIIGQKHFWKARRAIA 352


>Glyma14g10530.1 
          Length = 621

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 21/134 (15%)

Query: 96  NQQNPDLPGANFSRFCENDDFLQQESTAFLQQDNSGNGEGVPELTREIEKGNIFCPRSDS 155
           NQ++ D    N +R  ++D  LQ+E                     +++ GN   PR   
Sbjct: 172 NQEDQDYSVPNINRLHQDDACLQKE---------------------DMDNGNALVPRGCF 210

Query: 156 LSREDCSSPNKPEIDCELSGEKTCRSLQFGNGDKSDDVSETSMVDSISALDISPDEVVGI 215
            S  + + P +   D E    +T   +Q GN D+SD++S+ S V ++S+L +SPD+VVGI
Sbjct: 211 HSAANQTHPLEATNDAEYHDTRTGGPIQKGNFDESDNISKISTVTNLSSLIVSPDDVVGI 270

Query: 216 IGQKHFWKARRAIV 229
           +GQKHFWKARR I 
Sbjct: 271 LGQKHFWKARRKIA 284